Gene Tcr_0280 details

Gene Information

• Locus tag: Tcr_0280
• ID: 3760658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 327644
• End bp: 328135
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637784985
• Product: hypothetical protein
• Protein accession: YP_390550
• Protein GI: 78484625
• COG category: [R] General function prediction only
• COG ID: [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0000000675862
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA GTAAAGTTTT AGGGCTGTTT TTATACCTCA TCATGGGGCA TGCTTTTGCA 
AACGATGTGA TTACCACTAA AAACATTGGA TTAGGGCTTG CAAATGACAT TGCAATTGCC 
AGTATACAAG CTTGTCAAAA ACAAGGGTAT CAGGTGAGTG CTGTGGTGGT TGATCGTAAC 
GGTGTGCTGC GTTCGGCCAT GAGAGATGAT CTTGCGCCGA GATTTACATT ACAAATTGCT 
CAAGAAAAAG CCAATATGGT AGTGATGTCA GGAATCAAGT CAGGTGAGTT TCGTCAGTTA 
AGAGCGGATA TTCGTCCGGA ACTCAATCAT ATTGACGGCT TAATTGTCAT GGAAGGCGGG 
ATTCCTATTA AAGCAGCGGG TATCAAAATT GGTGCTGTTG GCGTGAGTGG CGCCCCGGGT 
GGTGACAAGG ATGAAGTGTG CGCGGTTAAA GGGGTCATGT CTGTGCAAGA ACGTTTGGAT 
TTTGCAGAAT AA 

 

Protein sequence

MKKSKVLGLF LYLIMGHAFA NDVITTKNIG LGLANDIAIA SIQACQKQGY QVSAVVVDRN 
GVLRSAMRDD LAPRFTLQIA QEKANMVVMS GIKSGEFRQL RADIRPELNH IDGLIVMEGG 
IPIKAAGIKI GAVGVSGAPG GDKDEVCAVK GVMSVQERLD FAE