| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0273 |
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| Symbol | |
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| ID | 3761443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 320615 |
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| End bp | 321445 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637784978 |
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| Product | spermidine synthase |
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| Protein accession | YP_390543 |
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| Protein GI | 78484618 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000512429 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTATC CAACCTGGGG ACAGCAGTTT GTGATGAATG ACGTGCTGTT TGAAGTCGAT
ACTGGGCATC AACATTTGAT TATTTTCAAG AATGATCAGT GGGGGACAGT GATGGCTCTG
GATGGGGTGA TACAGACCAC GGAAAAAGAT GAGTTCATTT ATCATGAAAT GATGACGCAT
GTGCCGATGT TCGCGCATGG CAACGCTAAG AAAGTGTTGA TTATCGGTGG GGGTGACGGA
GGTATTTTAC GTGAAGTGTT GAAACACCCA ACTGTTGACG CAGTAACTCA GGTTGAGATT
GATCAGCAAG TCATTGACAT GTGTAAGCAA TACTTGCCTA AGCACTCAGC GGGTGCTTTT
GAACACCCGA AGGCTAACGT GGTGATCGCT GATGGGGTGG ATTTCGTGAA TGAGTGCACT
GAAAAATTTG ATGTGATTAT TTCCGATTCA ACCGACCCGA TTGGTCCGGG GGAAGTTTTA
TTCACCTCTC GCTTTTACCA AGGCATTCAG TCATGTTTGA ACGATGGCGG GGTGTTTGTG
GCGCAAAACG GTGTCAGTTT TATGCAAACG GATGAAGTCA CGACTACTTT TAAGCGTTTG
TCACCCTTAT TCAACGAGTC GAGTTTTTAT TCGGCCGCTG TCCCCACATA CGTGGGAGGG
ATTATGACGT TTGCCTGGGC AACGAATGAT CTGAGTTTAA AGCAACAGTC CGTTGACGTC
ATTCGGTCAC GTTATGACGC CGCGGCGATT GAAACGCGTT TTTATACGCC GGAATTACAT
ATTGGGGCCT TTGCACTGCC CAAATACGTA CAACAAGCAA TACAAGCATA A
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| Protein sequence | MLYPTWGQQF VMNDVLFEVD TGHQHLIIFK NDQWGTVMAL DGVIQTTEKD EFIYHEMMTH
VPMFAHGNAK KVLIIGGGDG GILREVLKHP TVDAVTQVEI DQQVIDMCKQ YLPKHSAGAF
EHPKANVVIA DGVDFVNECT EKFDVIISDS TDPIGPGEVL FTSRFYQGIQ SCLNDGGVFV
AQNGVSFMQT DEVTTTFKRL SPLFNESSFY SAAVPTYVGG IMTFAWATND LSLKQQSVDV
IRSRYDAAAI ETRFYTPELH IGAFALPKYV QQAIQA
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