Gene Tcr_0272 details

Gene Information

• Locus tag: Tcr_0272
• ID: 3761442
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 320089
• End bp: 320592
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637784977
• Product: S-adenosylmethionine decarboxylase related
• Protein accession: YP_390542
• Protein GI: 78484617
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1586] S-adenosylmethionine decarboxylase
• TIGRFAM ID: [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000000000023706
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAATT CAGAAAACGT CCTGGTCACG GGTAACGACC ACTTTGAAGT GATTGAAAAA 
ACTACCGTGA TTGATGATAC CTGGCCAACA CATGACCAGG CGATTGAGGA TCAAACGTTA 
GATCATTTTA TTTGCCGAGA CGGTAAAACC TTTGCGGGCA CGCATTTAAT TGCAGATTTT 
TGGGGCGCAT CACATTTAGA TGACCTTGCG TTAATGGAAA AAGCGTTGCG TGAGGCGGTT 
GAAAAAGCGA AAGCGACGCT GTTGCACATT CATTTACATC ACTTTACGCC GAATGGTGGT 
ATTTCAGGGG TCGCTGTTCT GGCTGAGTCT CATATCAGTG TGCACAGTTG GCCCGAACGA 
AATTATGCGG CGTTTGATGT GTTTATGTGT GGCGATTCCG AACCCGCTAA AGCCATTGAA 
GTGTTAGAAG CCGCTTTCAC GCCGAGTAAA GTCGGGGTGG ACAATATTTT GCGCGGGGAA 
GTAACTGATG ACAACCAAAG CTAA 

 

Protein sequence

MPNSENVLVT GNDHFEVIEK TTVIDDTWPT HDQAIEDQTL DHFICRDGKT FAGTHLIADF 
WGASHLDDLA LMEKALREAV EKAKATLLHI HLHHFTPNGG ISGVAVLAES HISVHSWPER 
NYAAFDVFMC GDSEPAKAIE VLEAAFTPSK VGVDNILRGE VTDDNQS