Gene Tcr_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0269 
Symbol 
ID3761439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp317447 
End bp318253 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID637784974 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_390539 
Protein GI78484614 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000502728 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAA CACCAGATAT TTTAAAAAAA ATTATTTTCC GTAAATTGGA AGAAATTCAA 
GCCGGCTGCG ATCGCATTCC ACTCAGAGAA ATGAAGCAAA AGGCGTTGAT GATGACAACG
TCTCCCACAC GAGGGTTTGC CGATGCCATG CAAGCCAAAT TGGATGCTGG GCAGTCAGCG
GTGATTGCCG AAATTAAGAA AGCCTCTCCG AGTAAGGGCG TTTTACGTGA TCCATTTGAC
CCGGTTGAAA TTGCCAAGAG TTATCAAGCG CATGGTGCGG CTTGTTTGTC GGTGCTGACG
GATCAAGATT TTTTTCAAGG GTCGAATGAA TACTTGAAAC AGGTTCACGA CGCGGTGGAT
TTACCCATTA TTCGTAAAGA TTTCATCGTG GATGATTATC AGGTGTATGA AGCACGTGTG
ATTGGAGCGG ACTGCATTTT ACTGATTGCC GCCGCCATTG GCGATGCGCA ACTGTATGAA
CTCACGGAAA CCGCCTTGCA ATTAGGAATG GATGTCTTGG TAGAGGTTCA CAATGAAGAG
GAGATGGAAC GCGCCTTAAG ACTCCCGTTA CCGATGATTG GTATCAATAA TCGTGATTTA
CATACATTTA ACGTGTCATT GGAAACCACC ATTCGCATGT TGGATATGAT TGAAGATGAC
CGTATTGTGA TTACCGAAAG TGGTATTCTT GGGACAGAAG ATGTCGCGAA AATGCGCCAG
CACAAGGTTA ACAGTTTCTT GGTCGGGGAA GCCTTTATGC GAGCCGATGA CCCAGGTGAA
AAATTGGCGG AATTATTCGA TTTGTAA
 
Protein sequence
MNQTPDILKK IIFRKLEEIQ AGCDRIPLRE MKQKALMMTT SPTRGFADAM QAKLDAGQSA 
VIAEIKKASP SKGVLRDPFD PVEIAKSYQA HGAACLSVLT DQDFFQGSNE YLKQVHDAVD
LPIIRKDFIV DDYQVYEARV IGADCILLIA AAIGDAQLYE LTETALQLGM DVLVEVHNEE
EMERALRLPL PMIGINNRDL HTFNVSLETT IRMLDMIEDD RIVITESGIL GTEDVAKMRQ
HKVNSFLVGE AFMRADDPGE KLAELFDL