Gene Tcr_0260 details

Gene Information

• Locus tag: Tcr_0260
• ID: 3761430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 309476
• End bp: 310240
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637784965
• Product: type II secretion system protein N
• Protein accession: YP_390530
• Protein GI: 78484605

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGCT GGAGCGGGGT CGTCATTTTG TTTTTAAGTG TGGCGCTTTT GTCTTTTATC 
TGGCACTTTC CAGCCAGTTG GGCGGTGCAA CACAGTTGGG TCAAACAAAA TTTACCAAAA 
TCAATGAAGG TCTCAGAAGT CGATGGCCCC TGGTGGCAAG GCGCGGCAAA AGTGTCTTGG 
CAAAATAAAT CGTTAGGGGG GGTTGAGTGG CAGTGGCATC CTTTAAGTCT CTTTACGGGG 
TCGTTACCGC TGAGTCTGAA ACTCAATGCA CCCAAAGCGC AACTTAAAGC ACAGGTATTG 
GCGGACGCAA GCGATATCGT CGTTAAGGAT GTGAATGGAA CCTTCAATTT ATCTTATCTT 
TCCAATTTTT TGAAGTCTGC TTCCATATTG CAGGCAGCAG AAGGCGACGT GGTTCTTAAA 
GACGTGTCAA CGGCGCTTTC TCAAGCGAGT TTAAACAGTG GGCAAGTTTG GCCAAGTAGC 
CTTAAAGGGC AGGTGGTGTT AGTTGACTTC GACATGATGG GCGTTCACCT ACCATTGTTG 
AAAGTGACGC CAGAGCTCAA AGGCGAGTCG ATTAAGCTCC TCTTAAATGG GACGGGCAAG 
AGCTGGCAGT TAACCGGAAC CAGTACTGTG ACGGCGAATC ATCGTTTTCA GAATAATCTA 
ATGTTGACGT CGACAACTCC ACAAAGCTTT CCCAGCTGGG GAGGCATGAT GATGCAAAAA 
ACCGCTCCTA ATAAAGCGGT CTTAAAAAAC ACGGGTCGTT GGTAA 

 

Protein sequence

MKRWSGVVIL FLSVALLSFI WHFPASWAVQ HSWVKQNLPK SMKVSEVDGP WWQGAAKVSW 
QNKSLGGVEW QWHPLSLFTG SLPLSLKLNA PKAQLKAQVL ADASDIVVKD VNGTFNLSYL 
SNFLKSASIL QAAEGDVVLK DVSTALSQAS LNSGQVWPSS LKGQVVLVDF DMMGVHLPLL 
KVTPELKGES IKLLLNGTGK SWQLTGTSTV TANHRFQNNL MLTSTTPQSF PSWGGMMMQK 
TAPNKAVLKN TGRW