Gene Tcr_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0255 
Symbol 
ID3761520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp305932 
End bp306318 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content47% 
IMG OID637784960 
Productgeneral secretion pathway protein I 
Protein accessionYP_390525 
Protein GI78484600 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTGT TAACTAAAGA CATCCTCAAA AAAATAAGAG GCTTTACGCT GATTGAAGTG 
ATGGTGGCCT TGTTGATTGT GGCCATTGCG TTGGCGGCCT TGAGTATGGC GTTAGGCCAA 
ACCGTCTATC AGCAAGGAAC GATTGAAAAC CGTGTGGTCG CCACATGGGT TGCACAAAAC 
CGGATGATTG AAATTCAACA GGCACAAGAA ACCGGCGGTA AGATTGAGAA AACGTTCGAT 
GTCGTTATGG CGAAACGGAA TTGGCAGACA ACGTTAAGTT TGGAGCCGAC ACTTGTTCCG 
GACATTCAAA AAGCGAAGTT GCAAGTATTT TTAAAAGGGG AAGACCACAC CAGTGCAACG 
CTGTGGTCGG TGTTGGGTCA TGAGTGA
 
Protein sequence
MQLLTKDILK KIRGFTLIEV MVALLIVAIA LAALSMALGQ TVYQQGTIEN RVVATWVAQN 
RMIEIQQAQE TGGKIEKTFD VVMAKRNWQT TLSLEPTLVP DIQKAKLQVF LKGEDHTSAT 
LWSVLGHE