| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0251 |
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| Symbol | |
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| ID | 3761516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 302287 |
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| End bp | 303741 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637784956 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_390521 |
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| Protein GI | 78484596 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC TTCCCTTTCC ATTTGCGAAC AAAAACGGGG TTGTCTTAGG GATGCACCCT
GATATTGGGC GCGTTTTATA TTGTTTGGAA CAGACTTCTC CTACAGTTTT GATGGAAGTA
CAACGCGTTT TTGGCAGTGA AGATTTAGTG GTACGACCAT TATCCGAATC CGCATTTGAA
AAACAACTAC AAGCGCAATA TGCTTCACAG TCGTCTAACT CCATAGAAGC CATGGATGAA
CTGGACATTC CTGATTTAGA TCAAGCCATG GCCGAAGTCG CGACAGCGGA AGATTTGCTG
AACAGTAATG ATGATGCACC AATCATTAAA TTGCTGAATG CGATTTTGGC AGAAGCCATC
CGCAAGAATG CATCTGATAT TCATATCGAA CCGTTTGAAA CGCAATTGCG GGTGCGTTTC
AGAATTGATG GTCAGTTGAA AGTGGTGCTG ACCCCTAAAA TTCAGTTTGC TTCAATGCTG
GTTTCTCGTA TCAAAGTAAT GGCGAAGCTG GATATTGCGG AAAAAAGATT ACCTCAAGAT
GGTCGTATTG CGATCAAGCT GGGTGGGCGT GCCGTCGACT TACGAATTTC AACCATTCCT
TCCAGTTTTG GTGAGCGTGT GGTAATGCGA CTGCTGGATA AAAGTGCTGG CCGATTGGAT
TTAACGGATT TAGGTCTGCC AGATGAACAG CTTTTACGCC TTAAGAAACT GTTACAAAAA
CCGCATGGCA TTTTGTTGGT AACCGGCCCT ACCGGTTCCG GTAAAACAAC TACCTTATAT
GCGGGGTTGT CCCGTTTAAA TGACAATCAA CGAAATATCA TGACCGTTGA AGACCCTATT
GAATATAACA TTGAGGGGAT TAACCAGACT CAGGTGAATA CCAAAGCCGA GATGACGTTT
GCCAAAGGCT TAAGAGCGAT TCTGAGGCAA GATCCCGATG TTGTTATGAT CGGTGAGATT
CGTGACTATG AAACCGCAGA AATTGCCGTG CAAGCTTCTT TAACAGGGCA TTTGGTTTTA
TCGACCTTGC ATACCAATAC GGCTGTGGGC GCCATTTCGC GGTTGAAAGA CATGGGCGTG
GAACCGTTTT TATTGTCTTC CAGTTTGTTA GGCGTGATGG CACAGCGCTT GGTTCGTCAG
ATTTGCCCGG AATGTGGTGA GAAAAAGCCG GCGGATGATG CCGAGTGTCA GATATTAGGC
GTGGCGTCCG CTGAAATTAT GCACCCTGTC GGGTGTGAGG CTTGTTCTTA CACTGGATAC
CAAGGTCGAA TAGGGATTTA TGAGTTGTTA GAAATTGATA ATACTGTACG TCAAATGATT
CATTCGGGCG AATCCGATCA AGCGATTGAA ACGTATGTTC ATCAAACCAC ACCGTCGATT
TACCAAAGTG CCATGCAACT GGTTCTTAAT CGACAGACTT CTCTGGAAGA GGTGATGCGT
GTGGTACAGC GTTAA
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| Protein sequence | MNALPFPFAN KNGVVLGMHP DIGRVLYCLE QTSPTVLMEV QRVFGSEDLV VRPLSESAFE
KQLQAQYASQ SSNSIEAMDE LDIPDLDQAM AEVATAEDLL NSNDDAPIIK LLNAILAEAI
RKNASDIHIE PFETQLRVRF RIDGQLKVVL TPKIQFASML VSRIKVMAKL DIAEKRLPQD
GRIAIKLGGR AVDLRISTIP SSFGERVVMR LLDKSAGRLD LTDLGLPDEQ LLRLKKLLQK
PHGILLVTGP TGSGKTTTLY AGLSRLNDNQ RNIMTVEDPI EYNIEGINQT QVNTKAEMTF
AKGLRAILRQ DPDVVMIGEI RDYETAEIAV QASLTGHLVL STLHTNTAVG AISRLKDMGV
EPFLLSSSLL GVMAQRLVRQ ICPECGEKKP ADDAECQILG VASAEIMHPV GCEACSYTGY
QGRIGIYELL EIDNTVRQMI HSGESDQAIE TYVHQTTPSI YQSAMQLVLN RQTSLEEVMR
VVQR
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