Gene Tcr_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0241 
Symbol 
ID3761506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp285983 
End bp286915 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content48% 
IMG OID637784946 
Productcation diffusion facilitator family transporter 
Protein accessionYP_390511 
Protein GI78484586 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000961232 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTGT TTCAAAAAGG TGGTAACGAT TTGAAGTTGT TGAAATTGAC GCGTATTGCA 
ACCTATGCTT CCGTTCTGGT AGCGCTAACA TTGCTGATGG TGAAAGCGTA TGCCTGGTGG
GAAACGCGCT CTGTTGGGGT GCTGGCATCG TTGCTGGATT CCGGATTGGA TTTGGTGGCC
TCCATTATGA TTTTGTTTGC AGTGCGTTTG GCGCAAGTGC CGGCTGATAA TGAGCATCGT
CTCGGACATG GTAAAGCCGA GCCGCTGGCT TCGTTGGCGC AAAGTGTTTT TATTGCCGGG
TCGGCGTTGT ATTTGGTTCT GCATGCCATT GATCGACTGC TGTTTCCGAA GGAGATTCAA
GCACCTGAAA TCGGGATTTG GGTAATGTTA TTTTCCATGT TGTTGACGCT TTCGCTAGTT
GTTTTCCAGC GTTATGTGAT TCGCCGTACC GGCTCAAGCG CGATCACTTC AGACAGTTTG
CATTATGTAT CCGATTTGGG TGCGAACTTT GCGGTGTTGA TCGGGTTGTT GCTAGTTTCT
TGGCTTTGGG TGGATGCTTT TTTAGGGTTA TTGATTGGGG TTTGGATCGC CTGGCAGGCT
TTAAAGTTGG CATATGTCTC TTCCAATCAA CTGTTGGATC GCGAGTTGCC AGATGAAGTG
CGGGCGCAAA TTCAAGAAAT TGTCTTAAGC CATCCAGACG TTCGCGGGTT TAATGACTTG
AGAACCTTCC GCTCCGGGCC TACAATTTTT ATCCAGCTGG ATTTAGAGTT GGATGATGAT
TTGAGCCTGC TCGAAGCCCA TGCCATTTCG GAAGAGGTGA CGGCGAATTT ATTAAAGCAA
TTCGATAACG CGGATGTTCT GATTCACCAG GAACCAGTCA GTCTTCGAGA TGATCCGGAT
CACCATCAGT GGGAAGGGCA GCCCAATTTA TAG
 
Protein sequence
MSVFQKGGND LKLLKLTRIA TYASVLVALT LLMVKAYAWW ETRSVGVLAS LLDSGLDLVA 
SIMILFAVRL AQVPADNEHR LGHGKAEPLA SLAQSVFIAG SALYLVLHAI DRLLFPKEIQ
APEIGIWVML FSMLLTLSLV VFQRYVIRRT GSSAITSDSL HYVSDLGANF AVLIGLLLVS
WLWVDAFLGL LIGVWIAWQA LKLAYVSSNQ LLDRELPDEV RAQIQEIVLS HPDVRGFNDL
RTFRSGPTIF IQLDLELDDD LSLLEAHAIS EEVTANLLKQ FDNADVLIHQ EPVSLRDDPD
HHQWEGQPNL