Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0240 |
Symbol | |
ID | 3761505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 284692 |
End bp | 285942 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637784945 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_390510 |
Protein GI | 78484585 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000820845 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACCT ATCTTGTTGG CGGGGCAGTG CGAGATGCCT TATTGAATAT TCCGGTATAT GATCATGACT GGGTTGTGGT GGGGGCGACG CCGCAGGATA TGCTGGAACA AGGGTTTTCA CAGGTCGGGA AAGATTTTCC GGTGTTTTTG CACCCAAAGA CAAAAGAAGA ATATGCTTTG GCGCGCACAG AGCGAAAGAG TGGTCAGGGG TATCATGGCT TTGAGGTGTC TTTTGATCCG ACGGTGACAT TGGAAGATGA CCTCATTCGC CGTGATTTGA CCATCAATGC GATGGCGCAA GATGCCGAGG GGCAAATCGT TGATCCTTAT GGTGGTCAGC AGGACTTGGC GGATAAGGTG TTGCGTCATG TCTCTGAGGC TTTCGCTGAA GACCCTTTAC GGGTGCTGCG AGTGGCGCGT TTTGCGGCGA AATTGTCGGC CTTTGGGTTT ACGCTGGCAC CGGAAACGGC CGCTTTAATG AAGTCGATGT CGGCGTCTGG CGAATTGTCG GCCTTAACGC CTGAACGTGT TTGGCAGGAA GTGGTGAAGG CACTCAATAC GCAAACCCCC AGTGTCTTCT TTGAGGTGTT GGATCACGTC AATGCGTTGT CGATTTTGTT TCCCGCATTA GACGCTTTAA AGGGTGTGCA GCAGCCTGAA AAACATCATC CGGAAGGTGA TGCTTGGGTG CATACAATGA TGGTTTTAGA TGCATCGGCC GCTTTGTCGA ATGATGTGTC TGTTCGGTTT GCGGCTTTGG TGCATGATTT AGGAAAAGGC TTGACCCCTA AAGCGCTTTG GCCAAAACAT CATGGCCATG AAAAAGCGGG CGTTCCTCTG GTGGCTGCTC TTTGTCAGCA GTATCGTGTG CCCAAGAAAA TACAGATTTT TGCGGAAAAA GTAACGGAAT ATCATGGTCT GATTCATCGT GGATTGGATT TAGAGGGGCA TCCTCATCTT AAAACGGCGA CCTTTTTAAA GGTTTTGTCC GCTTGTCAGG CGTTTAAGGA GGTTGCTCAA TTTGAATCTT TATTGATTGC ATGTGAAGCA GATGCAAAAG GACGGCTTGG TTTTGAAAGT CGTCCTTATC CTCAAAAGGA TTTTTGGTTA GAATTGGCTA AGCGAGCAAA TGCTGTCGAT AATCAAGCTA TTTTGGCGAC TGGGGTAAAA GGCGCTGAGA TTGGAGAAGC CATTGTGCAA GAGAGAATGC GCTTGATTGA GGATTTTGTC AGAGAGTATT CGGCCATCTA G
|
Protein sequence | MKTYLVGGAV RDALLNIPVY DHDWVVVGAT PQDMLEQGFS QVGKDFPVFL HPKTKEEYAL ARTERKSGQG YHGFEVSFDP TVTLEDDLIR RDLTINAMAQ DAEGQIVDPY GGQQDLADKV LRHVSEAFAE DPLRVLRVAR FAAKLSAFGF TLAPETAALM KSMSASGELS ALTPERVWQE VVKALNTQTP SVFFEVLDHV NALSILFPAL DALKGVQQPE KHHPEGDAWV HTMMVLDASA ALSNDVSVRF AALVHDLGKG LTPKALWPKH HGHEKAGVPL VAALCQQYRV PKKIQIFAEK VTEYHGLIHR GLDLEGHPHL KTATFLKVLS ACQAFKEVAQ FESLLIACEA DAKGRLGFES RPYPQKDFWL ELAKRANAVD NQAILATGVK GAEIGEAIVQ ERMRLIEDFV REYSAI
|
| |