Gene Tcr_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0240 
Symbol 
ID3761505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp284692 
End bp285942 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content48% 
IMG OID637784945 
Productmetal dependent phosphohydrolase 
Protein accessionYP_390510 
Protein GI78484585 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000820845 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT ATCTTGTTGG CGGGGCAGTG CGAGATGCCT TATTGAATAT TCCGGTATAT 
GATCATGACT GGGTTGTGGT GGGGGCGACG CCGCAGGATA TGCTGGAACA AGGGTTTTCA
CAGGTCGGGA AAGATTTTCC GGTGTTTTTG CACCCAAAGA CAAAAGAAGA ATATGCTTTG
GCGCGCACAG AGCGAAAGAG TGGTCAGGGG TATCATGGCT TTGAGGTGTC TTTTGATCCG
ACGGTGACAT TGGAAGATGA CCTCATTCGC CGTGATTTGA CCATCAATGC GATGGCGCAA
GATGCCGAGG GGCAAATCGT TGATCCTTAT GGTGGTCAGC AGGACTTGGC GGATAAGGTG
TTGCGTCATG TCTCTGAGGC TTTCGCTGAA GACCCTTTAC GGGTGCTGCG AGTGGCGCGT
TTTGCGGCGA AATTGTCGGC CTTTGGGTTT ACGCTGGCAC CGGAAACGGC CGCTTTAATG
AAGTCGATGT CGGCGTCTGG CGAATTGTCG GCCTTAACGC CTGAACGTGT TTGGCAGGAA
GTGGTGAAGG CACTCAATAC GCAAACCCCC AGTGTCTTCT TTGAGGTGTT GGATCACGTC
AATGCGTTGT CGATTTTGTT TCCCGCATTA GACGCTTTAA AGGGTGTGCA GCAGCCTGAA
AAACATCATC CGGAAGGTGA TGCTTGGGTG CATACAATGA TGGTTTTAGA TGCATCGGCC
GCTTTGTCGA ATGATGTGTC TGTTCGGTTT GCGGCTTTGG TGCATGATTT AGGAAAAGGC
TTGACCCCTA AAGCGCTTTG GCCAAAACAT CATGGCCATG AAAAAGCGGG CGTTCCTCTG
GTGGCTGCTC TTTGTCAGCA GTATCGTGTG CCCAAGAAAA TACAGATTTT TGCGGAAAAA
GTAACGGAAT ATCATGGTCT GATTCATCGT GGATTGGATT TAGAGGGGCA TCCTCATCTT
AAAACGGCGA CCTTTTTAAA GGTTTTGTCC GCTTGTCAGG CGTTTAAGGA GGTTGCTCAA
TTTGAATCTT TATTGATTGC ATGTGAAGCA GATGCAAAAG GACGGCTTGG TTTTGAAAGT
CGTCCTTATC CTCAAAAGGA TTTTTGGTTA GAATTGGCTA AGCGAGCAAA TGCTGTCGAT
AATCAAGCTA TTTTGGCGAC TGGGGTAAAA GGCGCTGAGA TTGGAGAAGC CATTGTGCAA
GAGAGAATGC GCTTGATTGA GGATTTTGTC AGAGAGTATT CGGCCATCTA G
 
Protein sequence
MKTYLVGGAV RDALLNIPVY DHDWVVVGAT PQDMLEQGFS QVGKDFPVFL HPKTKEEYAL 
ARTERKSGQG YHGFEVSFDP TVTLEDDLIR RDLTINAMAQ DAEGQIVDPY GGQQDLADKV
LRHVSEAFAE DPLRVLRVAR FAAKLSAFGF TLAPETAALM KSMSASGELS ALTPERVWQE
VVKALNTQTP SVFFEVLDHV NALSILFPAL DALKGVQQPE KHHPEGDAWV HTMMVLDASA
ALSNDVSVRF AALVHDLGKG LTPKALWPKH HGHEKAGVPL VAALCQQYRV PKKIQIFAEK
VTEYHGLIHR GLDLEGHPHL KTATFLKVLS ACQAFKEVAQ FESLLIACEA DAKGRLGFES
RPYPQKDFWL ELAKRANAVD NQAILATGVK GAEIGEAIVQ ERMRLIEDFV REYSAI