| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0239 |
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| Symbol | |
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| ID | 3761504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 283627 |
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| End bp | 284598 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637784944 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_390509 |
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| Protein GI | 78484584 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000144523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGCA ATAAAGTAGT TGTATTAGGC GGAACGGGGT TTATTGGTCG TTCGGTTGTC
AATGAGTTGT CAAAAAGTGG CTATGAGATT TCGGTCGTTG TACGTCGCCC AGAAAGATTT
CGTGACTATA TGTTATACAA AAACACGAAA TTGGTTCAAA TCGATAGTTT GCTAGACTCA
GAAGGACTGA AAAAAGCTTT TATGGGAACA GATGTTGTGG TGAACCTAAC CGCTGATCTG
ACCGCGAAAA CAGAAGCGGT TTCGGAAAAA GACATTGTTG CGGTCAATCA ACAGATTAAG
AAAGCGGTTG AGTCAGCAGG CATAAAACGC GTTGTGGCTT TATCTCAAAT TGGTGCCGAT
GCAAATAATG CGCGTAACAA CTGGTTGTAT AACTTAGGCG AATCCGATGC CATCATGCAT
ACGATTTCTT GCGCTCAAGT GACGATTCTA AGAGCCGGAC TATTGTTGGG CGAGGGAGAT
GAAGTGGCGA CTCGATTTAA AAATCAGTTG AACCTGTTCC CAGTGCTTCC TGTGGCCAAT
GCCAGTGTTG CTGTTCAGCC ATTGTCTGTG AAAGATTTTG CAAAAGCGTT GGTGCTAAGC
ATTAAAGACA CGACGTTATT CGGTAAGAAA GTCGAAGTGG TCGGCGAAGA GCGCATGGCG
TTGAAAGACT TGGCAAGTCT AGTCAGAGAC ATGATGCAAA AAGACGATGC CTTGGTGATT
CCCATGTGCT CTTTGAATGC AAAGTTCATG AGTTTTTTAA ATGCATTCGC GCCAATTCGT
TCGGTTTCTA AAGTGCAGTT AAGTCTTTTA AAATCCGATT TGATTTCAGA TCAAGACTTT
TCAAATCGTT TTGGGTTTGT GCCAATGAGT GTGGAACAAA CGTTGGCCAG TTATGTGTTG
CCGACCAATA TGCGAGAGCG CTACAATTTC TATCGACAGG AAGCCGGTCG AAATGAAGAT
GAATTGGTTT AA
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| Protein sequence | MTGNKVVVLG GTGFIGRSVV NELSKSGYEI SVVVRRPERF RDYMLYKNTK LVQIDSLLDS
EGLKKAFMGT DVVVNLTADL TAKTEAVSEK DIVAVNQQIK KAVESAGIKR VVALSQIGAD
ANNARNNWLY NLGESDAIMH TISCAQVTIL RAGLLLGEGD EVATRFKNQL NLFPVLPVAN
ASVAVQPLSV KDFAKALVLS IKDTTLFGKK VEVVGEERMA LKDLASLVRD MMQKDDALVI
PMCSLNAKFM SFLNAFAPIR SVSKVQLSLL KSDLISDQDF SNRFGFVPMS VEQTLASYVL
PTNMRERYNF YRQEAGRNED ELV
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