| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0232 |
|---|
| Symbol | |
|---|
| ID | 3761632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 276029 |
|---|
| End bp | 278236 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637784937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390502 |
|---|
| Protein GI | 78484577 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGATT TAATGAAAAA GGCGTCAACA GAAGATTCCC AAGATTCATC CGTAACACAC
ACCTCCAAAA ACGTTCAGGT CGAAGTGATT GAACCTGAAA ATCCGAGTCG CCGTGCGTTA
TTAAAAGCGG GCTTACTGGG AGTGGGTGGA CTCGTGCTTG GTTTCAATTT ACCGTCAGCT
CAAAAAGCCT ACGCAAAAAC GGATGCTTCA ACCTCAGACA GCTATCCGGT TAAAGGGTGG
CTGCAGTTGG ACGAAAGTGG TCAACTCGCC ATGTTTATTC CGGTTTCCGA AATGGGGCAA
GGGTCACAGA CAGCCATTAC CATGATTTTT GCCGATGAAT TGGGCGCGGA TTATCAAAAG
GTGGTGGTGA AGTCACCCAT TAATGATTCC CTTTACAACA ATCCGATTTT TGGTATGCAA
TTAACAGGTG GGAGTACCGC TGTACGCGCA TGGTGGGAGC CGATGCGTGT GATTGCGGCG
ACTTTGCGTG AGATGTTAGT TGAATCAGCT GCCAAGCAAT GGCAGGTCTC CGCCAAGGAG
TGTGACGTTA AAGAAGGCTT TATCCTCCAT AAAGCAACCC AACGTAAAAT AGCTTTTCAG
CATGTCATTG ACACGGCTAA GTGGGTTCAA CCCCCTAAAA GTCCTACCCT TAAGAAAGCA
AGTGAATACC GTTACATTGG TAAACCCATG CACAGAGTGG ATACATCCAG TAAAGTGAAT
GGTACGGCGG TCTTTGGGAT TGACGTTCAA CTGCCCGATA TGTTGATTGC AACCGTTGCA
CAGTCACCGG TGTTTGGTGG GCAAGTAGAC AGCTACGATG AAAAATCCGC CAGATCCGTC
AAGGGTGTGA AAGGTATCGT TAAAATTCCA CATGGCATTG CCGTGGTGGC CGACAGTTAT
TGGCAGGCCA AAAAGGGATT GGAAAAACTC AAACCAACCT TTAAAGGTGG CGACACGGTT
GGGCTGAACA CCGATAACAT TGAGAAGCGC TTACATGACG GTTTAAACAA ATCTGGAGAG
TCGGTTAAAT CGGCTCAAGC AGTGACCGAT TTTGAACATA AATATGAAGC TGTCTACTCC
GCCCCTTATC TGGCGCATAC TACGATGGAG CCGATGAACG CCACAGCGCA TGTGACCGAT
TCACACTGTG AAGTCTGGGC TCCGACTCAA AACCAGGCAC AATCCGCTAA GGTCGCAGCG
GATGTAAGCT TGCATCAGCC CGACCAAGTC ACTATTCACA CCACCTATCT TGGGGGTGGG
TTTGGGCGCA GAGCCTTTGT TGATTATGTC GCGCAGGCCG TGACCCTTTC TATGGAAATG
GAACGTCCGG TGAAAGTGAT TTGGTCTCGT CCGGAAGACA TTCAGCATGA CTTTTATCGT
CCTGCGGCGG TCTGTCAGTT TGATGTAAAA ACCGATGCCA AAGGGTTGCC GGTTGAATGG
AAAACCAAAG TAGTGTCCGA TTCCACCATG GCCGAATTCA CCAATGGTTC AGATACCATG
ATTGATGGTG CCATGTCTGA AGGGTTGGCT GATCAAGAGT ATCAATTGCC GAATGTGTCA
TTGTCTGTGG TGCGTGAAGA CATGAAAATT CCGGTTGGTT TCTGGCGTTC GGTCGGGCAC
TCTTACAGCG GCTTCTTTCT AGAAGGCATG TTGAATGATC TGGCGCAAAA AGCCGGCTAT
GACCCGTTTG ATTACCGACG TGCACTGCTC AAGCCCGATT CAAGAACCGC AGGCGTGTTG
AACCAATTGG AAAAACTTTC CGGTTGGAAA TCCAAGTCAG CAGATAATAT TGGCAAAGGC
ATGGCGGTTG TCGAAAGCTT TGGCAGCTTT GCAGGTGAAG TGGTTGAAGC GCACCTAGAG
AACGGGAAAA TCAAAGTGGA TAAAGTCTAT TGTGTGATTG ACTGCGGCAT GGTGGTCAAC
CCTGAAATCG TCAAAAGACA GATGAGTTCC GGGATTATCT ACGGACTAAC AGCGGCGCTG
AAAGGAAAAA TCCATTTCGA ACAAGGTCGG GTCAAAGAAA CCAATTTTGA TGATTATCCG
GCTCTCATGA TGGATGAAAC GCCGGAGATT ATTGTCGAGA TTGTCAAAAG CGAAAACGGC
CCCGGCGGTT ATGGTGAACC CGGCGTTCCG CCGCTTGCTC CAGCACTCGC TGCAGCGGTC
AGCCAGCTAA CCGATAAAGT CTATCGTGAC TTACCGCTGA AGGTGTAA
|
|---|
| Protein sequence | MQDLMKKAST EDSQDSSVTH TSKNVQVEVI EPENPSRRAL LKAGLLGVGG LVLGFNLPSA
QKAYAKTDAS TSDSYPVKGW LQLDESGQLA MFIPVSEMGQ GSQTAITMIF ADELGADYQK
VVVKSPINDS LYNNPIFGMQ LTGGSTAVRA WWEPMRVIAA TLREMLVESA AKQWQVSAKE
CDVKEGFILH KATQRKIAFQ HVIDTAKWVQ PPKSPTLKKA SEYRYIGKPM HRVDTSSKVN
GTAVFGIDVQ LPDMLIATVA QSPVFGGQVD SYDEKSARSV KGVKGIVKIP HGIAVVADSY
WQAKKGLEKL KPTFKGGDTV GLNTDNIEKR LHDGLNKSGE SVKSAQAVTD FEHKYEAVYS
APYLAHTTME PMNATAHVTD SHCEVWAPTQ NQAQSAKVAA DVSLHQPDQV TIHTTYLGGG
FGRRAFVDYV AQAVTLSMEM ERPVKVIWSR PEDIQHDFYR PAAVCQFDVK TDAKGLPVEW
KTKVVSDSTM AEFTNGSDTM IDGAMSEGLA DQEYQLPNVS LSVVREDMKI PVGFWRSVGH
SYSGFFLEGM LNDLAQKAGY DPFDYRRALL KPDSRTAGVL NQLEKLSGWK SKSADNIGKG
MAVVESFGSF AGEVVEAHLE NGKIKVDKVY CVIDCGMVVN PEIVKRQMSS GIIYGLTAAL
KGKIHFEQGR VKETNFDDYP ALMMDETPEI IVEIVKSENG PGGYGEPGVP PLAPALAAAV
SQLTDKVYRD LPLKV
|
|---|
| |