Gene Tcr_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0229 
Symbol 
ID3761629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp274176 
End bp274607 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID637784934 
Producthypothetical protein 
Protein accessionYP_390499 
Protein GI78484574 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGTT ATCTTTCTTT ATTTTTAGTC TCATTTTTGG CCGCAACGCT GTTACCAGCA 
GGATCGGAAA TTTTATTATT GGGGCTGGCT TCAGCAGGGC ATGACCCGTG GCATTTATGG
TTTTGGGCCA CACTGGGCAA CACGCTGGGC GCAATGCTGA ACTACGCTTT GGGGCGTTAT
TTACTGCATT ACCAAGACCG ACGCTGGTTT CCAATCAAGC CTAAAACCCT GGAAGCCAGC
CAACATTGGT TTCAACGCTA TGGCACCTGG TCATTATTAT TGGCTTGGGC CCCTATTTTC
GGTGATGCCT TAACCTTCAT TGCAGGCATT ATGCGAGTGC GCTTTTATTG GTTTGTGATT
TTAGTTTTCA TTGGTAAAGG GGCTCGTTAT GCAATTCTGC TCGGCCTGCT CGATTGGCTG
ATGTCCTCTT AG
 
Protein sequence
MDSYLSLFLV SFLAATLLPA GSEILLLGLA SAGHDPWHLW FWATLGNTLG AMLNYALGRY 
LLHYQDRRWF PIKPKTLEAS QHWFQRYGTW SLLLAWAPIF GDALTFIAGI MRVRFYWFVI
LVFIGKGARY AILLGLLDWL MSS