| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0227 |
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| Symbol | |
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| ID | 3761627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 271082 |
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| End bp | 273613 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637784932 |
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| Product | response regulator receiver/diguanylate phosphodiesterase |
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| Protein accession | YP_390497 |
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| Protein GI | 78484572 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAA ATGCTTTAAT CATTGATGAT GAACGTTCAA TTGCGGAATT GATTTGTTCG
GTTGCAGAGC TGGTTAATGT GCCTTGCCAT ATTGTTACGG ATGCGACGAC TATAAAAGAA
TCGGATCTGC AGAATATTAA TTTGATTTTT CTTGATCTCT GGATGCCGGA CAAAGATGGG
ATTGAAGTAC TAGGGTGGCT TCAACAACAA GAGTATAGTG GGTGTCTTGT GTTGATGAGT
GGGGTGGACT CTTCCGTGTT GATGAGTGCA GAAGGGTTGG CTTCGGCATA CGGCATAAAA
GTGATTGGAC ATTTGAATAA GCCATTTGAC GTGAAGGAAG TTCAAACACT GATAAAAAAA
GCCCAAGAGA TTTCGCATAA AGATTTTCTT GAGCAGTCGT CCTTAGCCAT GGAAGAAAAG
TTAATGACAC CTCCGGCCAT TCAAAAAGCG TTGGATGAAG ATCGTGTCAC CGTTTTTTAT
CAGCCTCAAG TGGACTTGAA TACTCAGCGA GTGGTTGGGT TTGAAGCCTT GGTCAGAATT
CTTTCTCCTG AAAATGACGT CATTTACCCG AACCGTTTCT TATCGGTGGC AGAAGAACAT
GGGCTCATAC ATGATATTAC CAGTCGAGTT GTCGATCAGG CTTTGGGTGA GTTTACAGAA
TTATTAAACA AGTACGGTCA ATTGACGTTA TCAATTAACT TATCCACGCA AGATTTAGAA
GACCTGAAGT TTGCAGATTG GTTATATGAA AAAGTTGATG AATTGGGGAT TCCACGCGGC
AAAATCATCT TTGAAATTTC CGGGATTGAA AAATTACCGT CTTATTCCTT GGTGGTGGCA
GGTCTAAGCC GTTTAAGGCT GAAAGGGTTT AAAGTGTCAT TGGATTACTT CGGTGCTGGC
AATGTCACGT TGGAACAGGT ACAAACCTAT CCCATTACCG AATTAAAGAT TGATCCGAGC
TTTGCCGTCA ACATTATGAC GGATGAAAAG TCGGCCATCC TGATTAAAAG CACCCTGCAG
ATGTGTCATG CTTTGGACTT GGATGTGGTT GTAATCGGTG TGGAAAGTGA AGCCATTGCA
GCGCAACTCA AACTTTTGGG CGCGCGGATT GTACAAGGGT ATTGGTACTC GCGCTCGCTT
AGCTTTGAGA AAACACTGGA ATTTTTGGAA CAGAATGAAG AAGCCATGCC GGTTGAAACC
GTCAATTTGT GTGCCTTGAC CGAACAAGAG TCGACAGAGA CCGAAGTCAA ACTTCATCAG
CACGAGGATT CACCGCCGCA CAAAGATGAG AATGAGCGTG TTTTATCAAT GGTTGAAGCG
CTTGAGACCA AATTAAATCA ATCTGAAACC GCCTCGGTTG AGGAAAAGCA TCCAAACCGT
GACAGTCAAT CTTCTCAACC GTTGGATACG GATTCAGCGA AGGATGTTGA AAATACGACG
GTTGCAAAAC ACGACAAAGA GGTTAATGAG GAAATACATC AGGAAGAAGA ATCTGCTTTA
GCCCAATCCA AAATCAAGTT AGGCAAAGCG ACACCACGTG CCATGCTAAC CTTTATTTTG
CCATTAACCG GTAAATTCAG CTTTATTGGG AACAGTCAAA AGTTCGGGAT GATTTTGGCC
TATCTTGCTG CATTCGAAGA ACGTCGCACG GATTGCTATA TTGGACTGGA GTTTTATGAT
GATGCTTCTG CGCTCGATCA ATTTTATACC TATGTGGAAA AGCATATCTC TTCCAAGAGT
ATCGGAATCA TAGGTCCGTC TTTTTCATTG TTTGAGTCCG AAGGCTTCGC TAAGAAAACC
GCTGGCAGTA AACTGCCTAT TATCGGTTCG TTTAACAGTT GTGACGATTT AAGAAAACCC
AATGCAAAAG GACTCTATAA CTTCAAACCT GGTGTCAGCG AGGAAATAAA TCTGATTTTG
GATCGTTTGA AAGACAACGG TAACAAGTCT CTGTGTATTA TTCCAAAAAC CCGTGTGAAT
ATGGGGCTGG ATCTAATCCG CGCACGCATG GATGCATCCG AAATCATCAG TTATGACATG
AAAGAGTTTA ATAAAGTCAT TCAAGCTGTG AAAAAACGAT TGCCAAATAA AGTGTTCTTT
TTTGGCTCGG CCAGAGCAAT GGTGAAGTTG ATTGAAGAGG TGAATGATGA AAATATTCAA
TATTACACAA CTTCGTTAGC CGGTACTGGA ATGTTGAAAA AACTGCTATC CCGTCAAGGA
AAACTCAACG TCATGGCCAC CAGCCCATTG CCAGATTTGC ACGGCGATAC CATGGTGGCC
AAGCTATTTC GTTCTCAAGC CAAAGAACGT CGAATACCTT CGAAGTTCAT TAATATTATC
AGCTTTGAAG CCTACTTGGT GACCAAGCTG GTTTTGGATT TATACATCAA ACATAATCAG
GACATGAATG CCAAGCAGTT GAAAAAAGCG CTGGAAAATT TATTCAGCTA TGATTTGGGA
CTGGATTATC CGGTTTCCTG GGCGCAGGAA ACAAGGCAGC TTTTACATCA TATTTACCTG
AATAAGCTAT AA
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| Protein sequence | MDVNALIIDD ERSIAELICS VAELVNVPCH IVTDATTIKE SDLQNINLIF LDLWMPDKDG
IEVLGWLQQQ EYSGCLVLMS GVDSSVLMSA EGLASAYGIK VIGHLNKPFD VKEVQTLIKK
AQEISHKDFL EQSSLAMEEK LMTPPAIQKA LDEDRVTVFY QPQVDLNTQR VVGFEALVRI
LSPENDVIYP NRFLSVAEEH GLIHDITSRV VDQALGEFTE LLNKYGQLTL SINLSTQDLE
DLKFADWLYE KVDELGIPRG KIIFEISGIE KLPSYSLVVA GLSRLRLKGF KVSLDYFGAG
NVTLEQVQTY PITELKIDPS FAVNIMTDEK SAILIKSTLQ MCHALDLDVV VIGVESEAIA
AQLKLLGARI VQGYWYSRSL SFEKTLEFLE QNEEAMPVET VNLCALTEQE STETEVKLHQ
HEDSPPHKDE NERVLSMVEA LETKLNQSET ASVEEKHPNR DSQSSQPLDT DSAKDVENTT
VAKHDKEVNE EIHQEEESAL AQSKIKLGKA TPRAMLTFIL PLTGKFSFIG NSQKFGMILA
YLAAFEERRT DCYIGLEFYD DASALDQFYT YVEKHISSKS IGIIGPSFSL FESEGFAKKT
AGSKLPIIGS FNSCDDLRKP NAKGLYNFKP GVSEEINLIL DRLKDNGNKS LCIIPKTRVN
MGLDLIRARM DASEIISYDM KEFNKVIQAV KKRLPNKVFF FGSARAMVKL IEEVNDENIQ
YYTTSLAGTG MLKKLLSRQG KLNVMATSPL PDLHGDTMVA KLFRSQAKER RIPSKFINII
SFEAYLVTKL VLDLYIKHNQ DMNAKQLKKA LENLFSYDLG LDYPVSWAQE TRQLLHHIYL
NKL
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