Gene Tcr_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0224 
Symbol 
ID3761624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp265215 
End bp266540 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content46% 
IMG OID637784929 
Producthypothetical protein 
Protein accessionYP_390494 
Protein GI78484569 
COG category[I] Lipid transport and metabolism 
COG ID[COG5379] S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATTT TGCCGACGGC TTTTCGTTAT AGCATAGCGA CAACTAAGCA ATCATTTAAA 
AGAGAGTCTT GTATGCCAAC CTCTGCAACG CCTGCGACCA AAGAACTGTT GAATTCGGCC
GTTAACAACA CGTCCATTTT CAGTCGAAAA GGATTTTTAG ATCGTTTGTT CACCCGGTGG
TTTGATCGAT TGGTTTACCC TCAAATATGG GAAGATCCGG AAGTCGATAT CAAAGCGTTG
TCGTTGAACC GGGATTCTCG AATTTTCACG ATCTCGTCAG GCGGCTGCAA TGCTCTGAAC
TACCTAACAG TTGCGCCGAC ATCGATCACT GTTGTCGATT TAAACGAAGC GCATATTGCA
TTGATTCAAT TAAAAAAAGT CGCTTTAACG CATTTACCGG ATTATGAATC GTTTTTCGAT
TTTTTTGGGC GCGCCAACCT GCCCAAAAAC ATGGACAGCT ATCAAATTCA CATCAAACCC
AATTTAGACC AGGCCACCTT AGACTATTGG GAAGGCAAGG AGACTTTTTG GGGGCCTCGC
CGCATTGAGT ATTTCACCAA TGGCTTTTAT CGTCATGGCT TACTCGGACG GTTTATTGGG
CTGATTCACT GGATCAGCAA ATCCTTGGGC TACGACATTC GCCAAGTGAT GCACGCAAGA
ACACGAGAAG ACCAACACAC GTTATTTGCA GAGCACGTGG CACCGGTATT TGATACCCGT
TTAATGAAAT TTTTGTGCAA TCGTTCAGTG GTGATGTACA GTTTGGGCAT TCCTCCGGCG
CAGTTTGATG AAATGGACAA AGAATCCAAA CAAGGCCAAT ACGGCATGCA TGATTTGCTG
AAAGAACGTG CCAGACGCTT GGCGTGCGAT TTCCCGTTGG AAGATAACTA TTTTGCCTGG
CAGGCCTTTA ACCGTGAATA TGACATTAAA TACCGACGAG CCGTGCCGCG TTATTTGAAA
AAAGACTATT TTGACGCACT CAAACAAGAC ATTGAGCGTA TTCATGTTTT CCATCAATCA
ATGACGGAAC GCCTGAAAGC GATGCCGGCT AACAGCCTGA ATGCGTATTT ATTTTTAGAC
GCTCAAGACT GGATGAATGC ATCCCAGCTG ACAGAGCTTT GGCAGGAAGT AAACCGTACC
GCCATGCCGG GTGCAAAAGT GGTGTTCCGC ACGGCAGGAG AAACATCGCC ATTGGAAGAA
AAGCTCCCCG AAACATTATT GGTTAACTGG TCAACGGACA TTGAAGCCAA TCGTGACTGG
ACCCAGCAAG ATCGCTCAGC GATTTATGGT GGCGTGCATA CCTACACTCT CTCTTCGGTT
GCATAA
 
Protein sequence
MVILPTAFRY SIATTKQSFK RESCMPTSAT PATKELLNSA VNNTSIFSRK GFLDRLFTRW 
FDRLVYPQIW EDPEVDIKAL SLNRDSRIFT ISSGGCNALN YLTVAPTSIT VVDLNEAHIA
LIQLKKVALT HLPDYESFFD FFGRANLPKN MDSYQIHIKP NLDQATLDYW EGKETFWGPR
RIEYFTNGFY RHGLLGRFIG LIHWISKSLG YDIRQVMHAR TREDQHTLFA EHVAPVFDTR
LMKFLCNRSV VMYSLGIPPA QFDEMDKESK QGQYGMHDLL KERARRLACD FPLEDNYFAW
QAFNREYDIK YRRAVPRYLK KDYFDALKQD IERIHVFHQS MTERLKAMPA NSLNAYLFLD
AQDWMNASQL TELWQEVNRT AMPGAKVVFR TAGETSPLEE KLPETLLVNW STDIEANRDW
TQQDRSAIYG GVHTYTLSSV A