Gene Tcr_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0221 
Symbol 
ID3761621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp261453 
End bp262697 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content49% 
IMG OID637784926 
Productpeptidase M24 
Protein accessionYP_390491 
Protein GI78484566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC GCGATGATAT GACCTTTCCT TTTGCAGAGT ATGAACGTCG GATTCATGAG 
CTCAGACAGC GTATGGAGAA GCGCCTGCTC GATGCGGTGA TTATTTCCGA CCCGGAAAAC
CTGATGTATT TAACCGATTA CCAGACGACG GGGTATTCGT TTTTCCAAGC GCTGGTGGTG
CCGTTGGAAA GCGAGCCTTT TATGGTGACG CGTAAGCTGG AAGAATCTAA CGTTATCGCG
CGTACCTGGG TTGAAATCAC GCGACCATAT CCCGACACGG GAGATGCGAT CCAAATGCTG
ATTTCTGCGT TGGTGGAGTT TGGATTGGCC GGAAAATCCA TCGGCTATGA ACGTAACTCC
TATTTTTTCC CAGCGTATCA TCAGGATACT TTTCATACCA CCTTTACCAA AAGCCGTTTG
ATGGATTGTT TTGGAATTGT GGAGCAAGGG CGAGTCTGTA AATCCAGTTA TGAACTTGAA
GTGATGAGAA AAGCAGCTGT CGCGACCAAG GCCGGCATGA AAGCAGGAAT TGAAGCGTGT
GCGCCCGGTG TGACTGAAAA TGAAATTGGC GGCGCGATCA GCCAAGCCAT GTTTGCGGCC
GGCGGTGAAA TTCCGGCGGT GATGCCTTAT GTGACGTCCG GGCCCAGAAC CATGATTGGT
CATGCTTCCT GGGAAGGACG AGAAGTGCAA CCCGGCGAAC ACGTCTTTAT GGAAGTGGCG
GGATGTTATC GCCGTTACCA CACGGCGATG ATGCGCACCG CGATCTGCGG CGAGCTGACT
GATAGCATGT ATAAGGCACA AGAGATTATG AAAGTGGCTT TGGCACATGC CCGCGAAAAA
ATGCGCCCCG GAATGACGGT TTCCGATGTG GATAATATGA TTCGAAACAT CATTTCGGAT
AATGAAATTG GTGCCAAACT GATTACCCGT TCGGGGTATT CCATCGGGAT TGCTTTTCCG
CCCAGTTGGG ATGAAGGGTA TATTTTGAGT TTGTTTCAAG GGGACAGCTC GGTGTTGGAG
CCGGGAATGA CCTTTCATGT GATTCCGTGG ATGTGGGGCA TTGATGGTGA TAAGACCTGC
GGCATTTCCG ATACTTTTTA CATCACCGAA ACCGGATGCG GTTCCTTTTT CGATGATGTC
GAACAGAATT TTACGTTGAA ATCCGATCAG CCGGCTTCCA ATGAAACATC GATTAAAGCC
GTTTCTCAGA ACAAAAAAAC GAAAAAATCC GAAACATCGG CATAA
 
Protein sequence
MIERDDMTFP FAEYERRIHE LRQRMEKRLL DAVIISDPEN LMYLTDYQTT GYSFFQALVV 
PLESEPFMVT RKLEESNVIA RTWVEITRPY PDTGDAIQML ISALVEFGLA GKSIGYERNS
YFFPAYHQDT FHTTFTKSRL MDCFGIVEQG RVCKSSYELE VMRKAAVATK AGMKAGIEAC
APGVTENEIG GAISQAMFAA GGEIPAVMPY VTSGPRTMIG HASWEGREVQ PGEHVFMEVA
GCYRRYHTAM MRTAICGELT DSMYKAQEIM KVALAHAREK MRPGMTVSDV DNMIRNIISD
NEIGAKLITR SGYSIGIAFP PSWDEGYILS LFQGDSSVLE PGMTFHVIPW MWGIDGDKTC
GISDTFYITE TGCGSFFDDV EQNFTLKSDQ PASNETSIKA VSQNKKTKKS ETSA