| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0192 |
|---|
| Symbol | |
|---|
| ID | 3762248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 226371 |
|---|
| End bp | 227309 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637784897 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_390462 |
|---|
| Protein GI | 78484537 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGC CTCTTAGAAT TATCTTCGCC GGTACCCCTG ACTTTTCCGT GCCCCCCCTT
AAAACCTTGA TTGACTCCGA GCATGAGGTA GTGGCGGTTT ACACGCAACC CGACCGCCCG
GCCGGGCGTG GACGAAAACT CACGGCCAGT CCCGTGAAAC AGACCGCGTT AGAGCACGAC
ATTCCCGTTT ACCAACCGGT GTCACTCAAA ACACCTGAAG CGCAGGCGGA ATTAGAAGCG
CTTCAAGCGG ACGTGATGAT TGTGGTGGCG TATGGCTTAA TACTTCCAAA AGCTGTTTTA
GACATGCCTA AGTATGGCTG TTTGAACATT CATGCTTCGA TCCTACCTCG CTGGCGAGGC
GCGGCACCGA TTCAGCGCGC GATTCAAATG GGCGATGCGG AAACCGGCGT GACCATTATG
CAAATGGATG TTGGGTTGGA TACCGGGGAC ATGCTCACCA TCTTGAAAAC CCCCATCAAG
CCGGAAGACA CCGCACAAAC CTTGCATGAC CGTTTAAGCG CGCTCGGATG TGACGCGATG
ATGACGACAT TGAGCAACTT ACAGACCGAC CAGCTGTCTC CTGTGAAACA GGATGAACGC
CAAGTCACCT ATGCTGAAAA ACTCAATAAA GCCGAAGCCG AACTTGACTG GCAGGCATCC
GCACAGACTT TAGCTCGACA AGTACAAGCG TTTAACCCTT GGCCGGTTGC GTTTACACAA
TACCAGGGTC AGCCTTTGCG TATCTGGCAG GCCGAAGTCG GTCATGCTTC AACCCAAAAA
TCGCCAGGCC TGGTCATTTC TGTCAGCAAA ACAGGGATGG AAGTCGCCAC TGGAAAAGGG
TCATTACTAA TTAAGCAGGT ACAACCGTCG GGCAAAAAAG CCATGCCTGC TTATGACTTT
GCGCAAGCTC GCCAGCTGAC TGGCCAAACA TTAGGATAA
|
|---|
| Protein sequence | MTQPLRIIFA GTPDFSVPPL KTLIDSEHEV VAVYTQPDRP AGRGRKLTAS PVKQTALEHD
IPVYQPVSLK TPEAQAELEA LQADVMIVVA YGLILPKAVL DMPKYGCLNI HASILPRWRG
AAPIQRAIQM GDAETGVTIM QMDVGLDTGD MLTILKTPIK PEDTAQTLHD RLSALGCDAM
MTTLSNLQTD QLSPVKQDER QVTYAEKLNK AEAELDWQAS AQTLARQVQA FNPWPVAFTQ
YQGQPLRIWQ AEVGHASTQK SPGLVISVSK TGMEVATGKG SLLIKQVQPS GKKAMPAYDF
AQARQLTGQT LG
|
|---|
| |