Gene Tcr_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0183 
Symbol 
ID3762239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp215614 
End bp216531 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID637784888 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_390453 
Protein GI78484528 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCTA AATCTGAACA GCGATGGCAA GGTAATGTTT TTATTGGGCT ACTGAAATTT 
TTTTCCTGGT GGTCGTTGCC AATCAATCAT GCTATGGGAA AAGCCATCGG CTACTTATTG
TGGTGGTTGC CTACATCGCC CAAACGGATT TCAGACATTA ATTTAAAAAT CGCTTTTCCC
GAACTGTCTG ACGCTGAGCG TCAAGCGTGT TTGAAGCGAA GCTTGCTTGA ACTGGGGAAA
ACCACAACGG AACTCGGTCC TATATGGTTA TGGGATGCGA AGCGAGTGTT TGACCTCATT
CAGTCTGTGC AAGGCGCTCA TTTGGTTGAT GAGGCTTTTC AACAAGAGAA AGGGGTCATT
ATTTTATCGC CGCACATTGG GGCCTGGGAA GTGATGGGCA TTTATCTTTC TCGTCACTAT
CCGATGACAA CGCTTTACCG CCCACCCAAC CTGCCGTCCA TTGAAGACTT TATGCGACAA
GTGAGAGAGC GCTCAGGTTC GACTTTGGTG CCTACGGACT TATCCGGCGT TAAAGCCTTG
CGCAAAGCGC TGAATAAAAA TGAAATGATT GGCATCTTGC CAGATCAAGA TCCGGGAAAA
AATGGCAGTA CTTATGCCCC ATTTTTCGGG CATCCTGCAC GAACGATGGT ATTGGTTTCC
AAACTGGCTT CCAAATCGAA AAGCGCTGTT TTTTTCGCCT ATGCCAAACG GTTGCCTAAA
GGGCAAGGGT ATGAGATTCA TTTTATGCCT GCGGATGATC AAGTTGCGGC GCAAGATGAA
TTGGTGGCCA CCACGGCACT CAACCAGGGT GTTGAACAAT GTGCCAGAGC GCTTCCTACT
CAGTATCAAT GGAATTACAA ACGTTATAAA CACCCTCCAG AAGGGGTTGA AGATGTGTAT
AAAAAAGCTA AAAAATAG
 
Protein sequence
MAAKSEQRWQ GNVFIGLLKF FSWWSLPINH AMGKAIGYLL WWLPTSPKRI SDINLKIAFP 
ELSDAERQAC LKRSLLELGK TTTELGPIWL WDAKRVFDLI QSVQGAHLVD EAFQQEKGVI
ILSPHIGAWE VMGIYLSRHY PMTTLYRPPN LPSIEDFMRQ VRERSGSTLV PTDLSGVKAL
RKALNKNEMI GILPDQDPGK NGSTYAPFFG HPARTMVLVS KLASKSKSAV FFAYAKRLPK
GQGYEIHFMP ADDQVAAQDE LVATTALNQG VEQCARALPT QYQWNYKRYK HPPEGVEDVY
KKAKK