Gene Tcr_0167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0167 
Symbol 
ID3762478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp198069 
End bp198518 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content47% 
IMG OID637784872 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_390437 
Protein GI78484512 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGTT TACTGCAAAG AGTGACTCAC GGAAGCGTGT CGGTTTCCAA TGAAACCATC 
GGACAGATTT CATCTGGCTT GGTGGTGTTA TGCGGATTCC AACCACACGA CACAACCGAA 
TCCTTAGAAA AAATGGCTCA TAAGCTCCTC CACTACCGCG TATTCAGTGA CGAAGATGAC 
AAAATGAATC TCAACCTGCA GCAAGCCTTC AGCGGCAAGG GTGGAGACTT GCTGCTGGTG 
CCGCAATTTA CCTTAGCGGC GGATACGAAA AAAGGTCTGC GCCCAAGCTT TCACACCTCG 
GCTTCGCCAG ATTTGGCACA CAATCTGTTT AATGAGTTTG TAGCGTTAAT TACCTTGAAG 
TTTGGTCCAC CTCAAACGGG AAAATTCGGC GCAAACATGC AGGTCAGCTT AATTAATGAC 
GGGCCTGTAA CCTTTTGGCT TGAAACCTAA
 
Protein sequence
MICLLQRVTH GSVSVSNETI GQISSGLVVL CGFQPHDTTE SLEKMAHKLL HYRVFSDEDD 
KMNLNLQQAF SGKGGDLLLV PQFTLAADTK KGLRPSFHTS ASPDLAHNLF NEFVALITLK 
FGPPQTGKFG ANMQVSLIND GPVTFWLET