| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0166 |
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| Symbol | |
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| ID | 3762477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 195891 |
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| End bp | 197984 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637784871 |
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| Product | response regulator receiver/GGDEF/EAL domain-containing protein |
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| Protein accession | YP_390436 |
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| Protein GI | 78484511 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTTT CTGAGACAAG CTCTAAGCAG ATTGATCCCA CTTTAATCCT CGTTGTTGAA
GACGACGATA CCACTCGCTT GACCCTCAAT AAGGTCTTAA CCAAATCCGG ATTTAAAGTC
ATTGATGCCA AAGATGGCCA AGACGGCTTT TCAAAGTTTA TCAATGAATC TCCCTGTTTG
ATACTCATGG ATGTGATGAT GCCCATTATG GATGGCTATG CCGCCACAGA AGCCATTCGA
AACTATGAAA AAACCCGTGC GGTTCCGATC TTAATGTTAA CACCGCAAGA TGACATGGGC
TCAATCGATC ATGCGTTTAC CAGTGGTGCG ACGGACTTTA TTACCAAACC GATCAACTGG
TCCTTGTTAA GTCAGCGTGT TAAATATGCC ATTAACTCTT CTTTAATCGA AGATCAATTA
CGGACCAGTC AGTCGCAACT TATGTACGCC CAAAAACTGG CGAAACTTGG CTATTGGGAA
TGGGATACCA AGGCCGACCA AGTCACCGGA ACCGGATCCG CTTTTGAACT GTTTGGCATT
CCCAATCAGG CAGATGTCAC TTTGGAACAA TTCTTTTCCA ATATTATTCC GAAAGACTTG
CCATTAATCC AGCAAGCCAT TGCGGACGCC AGCCAAGGGT ATAACGATAT CCAAGTCAGT
TTCCGAGTCC TGCATCATGA CAACTCTCTA TCTCACGTGG ATTGTTTGGG CGAAGTCAGC
TTTGATGAAC ATGGTGACAT TTCCAGAATC ACTGGTTCCG CGCAGGATAT CAGTCGCTTA
CATAAAGCGG AAACACTGAT TGATTACCAG TCCAGCCACG ATAAGTTGAC GGACTTGGCC
AACCGCTCAT TCTTTAACAA AAACCTAGCG AATTTTATAA AAGAAGCCAA CCCTAAAAAA
TACAGTGCCA CGGTGATACT CGATATTGAC CGTTTCAAAA AAATCAATGA TAACTTAGGT
CAAGAAAATG GTGATGCACT GCTTCGAACC GTTGCACAAC GCTTAAAGAA AGTGACGCGA
GAAGATGACT TTGTTGCCCG ATTAGGAAGT GATGAATTCG CTATCTTAAT TAAAAATACA
GAAGATGCTC AAGAATTAAA CTTATCCCTC AGCCGTATTT TTCATGACAT TTCAAAAGCC
TTTAATGTTA AAGATCAAGA GCTGTTTATC ACGTTCTCTA TCGGTATCAG TATCATTAAC
CAAGACGGCG ATCAAGCCAG TGAGCTGATA GCCCACGCGA ACATTGCTCG AAGCCAAGCC
AAACTCAAAG GCGGCAATCA GTTTTTATTC TATCAGGCAG AAATGAATGC CGAATCGAAA
GAGCAACTGA TGCTCGAGAA CGATTTAAGA AAAGCACTTG ATCGCAATGA AATTGAGGTT
TATTACCAAC CCCAGATTGA TGGCCATTCT TTAAAACCTT ATGGTGCAGA AGCATTGGTG
CGCTGGAAAC ATCCGACGGA AGGCATTATT TCTCCCGGCA TCTTTATTCC AATGGCCGAA
AGCAATGGCA TGATTGTCGA CATTGGTCGA TTTGTTTTAG AAAATGCCAT CAAAGAAGCC
GAAAAGTGGC ATGCTGAAGG GTTTGATGAA ATGCGCATTG CCGTTAACTT ATCGGGCCGA
CAATTTTCCA GTTCAAATCT GATTAAAGAA GTGCAAGAAG TTTTACAAAA CACAACGCTG
CCCGCCAAAT ACCTTGATTT GGAAATCACA GAAAGTTTGG CTATGAGTAA TGCCGATCAC
AACATCAGCA TTCTAAAGGG ACTGAAAGCC ATGGGCGTTT CATTGTCGAT TGATGACTTC
GGGACTGGCT ACTCTTCTCT CGCGTATTTG CACAGTTTCC CAATCGATGC GATTAAAATC
GACCGTTCCT TTATCGATAA CTTGGAAAGC CAGGAAGGGC AAGCCATTGT CAGAACAATC
TTGGCCATGG CCGACAGCTT AAGTCTAAAA GTGGTTGCTG AAGGGATCGA AGAAGAATTT
CATGTTACTT TCCTTCAAAA TAAGAACTGT GATATTTTCC AAGGCTTCAT GTTCGGTAAA
CCGATGCCTG CGGGAGATTT TCAACAGTAT CTTAAATCTC AAAAAGCGTC GTAG
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| Protein sequence | MPLSETSSKQ IDPTLILVVE DDDTTRLTLN KVLTKSGFKV IDAKDGQDGF SKFINESPCL
ILMDVMMPIM DGYAATEAIR NYEKTRAVPI LMLTPQDDMG SIDHAFTSGA TDFITKPINW
SLLSQRVKYA INSSLIEDQL RTSQSQLMYA QKLAKLGYWE WDTKADQVTG TGSAFELFGI
PNQADVTLEQ FFSNIIPKDL PLIQQAIADA SQGYNDIQVS FRVLHHDNSL SHVDCLGEVS
FDEHGDISRI TGSAQDISRL HKAETLIDYQ SSHDKLTDLA NRSFFNKNLA NFIKEANPKK
YSATVILDID RFKKINDNLG QENGDALLRT VAQRLKKVTR EDDFVARLGS DEFAILIKNT
EDAQELNLSL SRIFHDISKA FNVKDQELFI TFSIGISIIN QDGDQASELI AHANIARSQA
KLKGGNQFLF YQAEMNAESK EQLMLENDLR KALDRNEIEV YYQPQIDGHS LKPYGAEALV
RWKHPTEGII SPGIFIPMAE SNGMIVDIGR FVLENAIKEA EKWHAEGFDE MRIAVNLSGR
QFSSSNLIKE VQEVLQNTTL PAKYLDLEIT ESLAMSNADH NISILKGLKA MGVSLSIDDF
GTGYSSLAYL HSFPIDAIKI DRSFIDNLES QEGQAIVRTI LAMADSLSLK VVAEGIEEEF
HVTFLQNKNC DIFQGFMFGK PMPAGDFQQY LKSQKAS
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