Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0157 |
Symbol | |
ID | 3762449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 189475 |
End bp | 190470 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637784862 |
Product | hypothetical protein |
Protein accession | YP_390427 |
Protein GI | 78484502 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000097536 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAGGAA GTGATTCAGG TAGTTCTGAT GGTAAATATG CTTCTAACTA TGCTGAAATC ATTAAAGAAA ATGACGGTAA GTATCTTGAT TCTAAAGTTA TTGAAGCAAT TTTAGGAAAA GATGCTACTC ATGGTCGTGC GGGTATGGAA GGGAAATTAG ATCCTGCCAA CCCTTATTCT TTTGAAGTTG ATGACAGTAT CGATGGTGGT AACCACGGTA ATGCTCAGTG TAAAATTCCT GCGGCCTTCG TTGAGGTCCA TGAGAGCGCT GACAAAAACT ATTACAGCGA TGCTGATTTC GTTGCAAACG GTTTTGGTAC GCCAATCGCT GAGTCTGCAT TAGCCAAATG GAACATTACT GTTGATGGTG ATGGTAAAGG TTTACCAGAT CCTTCAGTAG GGATGACTGT TGAAGAAGGT GCGCGTGTTT ATGTGCAGTT CTGTGCTATG TGTCATGGTG AGTTCGGTGA AGGGGCAAAA GGGTATCTAC CATTAGCGGT AGAAGAAAAC CTAGTGACTT CAGACTTCCG TGATCCTGCT CCGATGAAAA CTGTTGGTAA CTACTGGCCA TATGCTGTGA CGTTCTTTGA CTATGTTCGT CGTACAATGC CTTTCTGGAC GCCTAATGCA CCATTCATCG GTGATAAAGG TTACATGGGT ATGACAGGTT ACATCATGCA ATCTAACTAC ATCCCAATCG GTTTAGATGA AGATGGTAAT AAGATTGAGC TAGAAGATGA TACTTTCTAT AACTCTGAAT TGCTGATGAA GCAAAACAAG TTCATGAAAA ACCAAGGTAA CTTCTTCTGT GATCACCGTC CGGTTATTCA TAACGAGCGT TGCATGAAAG ACTGTCCTGA TGTGATGGTT GGTGATGGTA AAGGAAACGT GAACAACTTC GTTCAAGCGC GTCGTTTACC AGATGGAACG CCTCAGTATA ACGTTCCTCA ACGTATGCAT GAAGATCCAC CAGGTGTTGG TCACGCTGGT ATGTAA
|
Protein sequence | MPGSDSGSSD GKYASNYAEI IKENDGKYLD SKVIEAILGK DATHGRAGME GKLDPANPYS FEVDDSIDGG NHGNAQCKIP AAFVEVHESA DKNYYSDADF VANGFGTPIA ESALAKWNIT VDGDGKGLPD PSVGMTVEEG ARVYVQFCAM CHGEFGEGAK GYLPLAVEEN LVTSDFRDPA PMKTVGNYWP YAVTFFDYVR RTMPFWTPNA PFIGDKGYMG MTGYIMQSNY IPIGLDEDGN KIELEDDTFY NSELLMKQNK FMKNQGNFFC DHRPVIHNER CMKDCPDVMV GDGKGNVNNF VQARRLPDGT PQYNVPQRMH EDPPGVGHAG M
|
| |