Gene Tcr_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0157 
Symbol 
ID3762449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp189475 
End bp190470 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content43% 
IMG OID637784862 
Producthypothetical protein 
Protein accessionYP_390427 
Protein GI78484502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000097536 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGGAA GTGATTCAGG TAGTTCTGAT GGTAAATATG CTTCTAACTA TGCTGAAATC 
ATTAAAGAAA ATGACGGTAA GTATCTTGAT TCTAAAGTTA TTGAAGCAAT TTTAGGAAAA
GATGCTACTC ATGGTCGTGC GGGTATGGAA GGGAAATTAG ATCCTGCCAA CCCTTATTCT
TTTGAAGTTG ATGACAGTAT CGATGGTGGT AACCACGGTA ATGCTCAGTG TAAAATTCCT
GCGGCCTTCG TTGAGGTCCA TGAGAGCGCT GACAAAAACT ATTACAGCGA TGCTGATTTC
GTTGCAAACG GTTTTGGTAC GCCAATCGCT GAGTCTGCAT TAGCCAAATG GAACATTACT
GTTGATGGTG ATGGTAAAGG TTTACCAGAT CCTTCAGTAG GGATGACTGT TGAAGAAGGT
GCGCGTGTTT ATGTGCAGTT CTGTGCTATG TGTCATGGTG AGTTCGGTGA AGGGGCAAAA
GGGTATCTAC CATTAGCGGT AGAAGAAAAC CTAGTGACTT CAGACTTCCG TGATCCTGCT
CCGATGAAAA CTGTTGGTAA CTACTGGCCA TATGCTGTGA CGTTCTTTGA CTATGTTCGT
CGTACAATGC CTTTCTGGAC GCCTAATGCA CCATTCATCG GTGATAAAGG TTACATGGGT
ATGACAGGTT ACATCATGCA ATCTAACTAC ATCCCAATCG GTTTAGATGA AGATGGTAAT
AAGATTGAGC TAGAAGATGA TACTTTCTAT AACTCTGAAT TGCTGATGAA GCAAAACAAG
TTCATGAAAA ACCAAGGTAA CTTCTTCTGT GATCACCGTC CGGTTATTCA TAACGAGCGT
TGCATGAAAG ACTGTCCTGA TGTGATGGTT GGTGATGGTA AAGGAAACGT GAACAACTTC
GTTCAAGCGC GTCGTTTACC AGATGGAACG CCTCAGTATA ACGTTCCTCA ACGTATGCAT
GAAGATCCAC CAGGTGTTGG TCACGCTGGT ATGTAA
 
Protein sequence
MPGSDSGSSD GKYASNYAEI IKENDGKYLD SKVIEAILGK DATHGRAGME GKLDPANPYS 
FEVDDSIDGG NHGNAQCKIP AAFVEVHESA DKNYYSDADF VANGFGTPIA ESALAKWNIT
VDGDGKGLPD PSVGMTVEEG ARVYVQFCAM CHGEFGEGAK GYLPLAVEEN LVTSDFRDPA
PMKTVGNYWP YAVTFFDYVR RTMPFWTPNA PFIGDKGYMG MTGYIMQSNY IPIGLDEDGN
KIELEDDTFY NSELLMKQNK FMKNQGNFFC DHRPVIHNER CMKDCPDVMV GDGKGNVNNF
VQARRLPDGT PQYNVPQRMH EDPPGVGHAG M