Gene Tcr_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0154 
Symbol 
ID3762446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp186250 
End bp187251 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content47% 
IMG OID637784859 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_390424 
Protein GI78484499 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000166942 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAC GCCAGTTTCC CATTACACGT ATGCGCCGCA TGCGAAAAGA TCCCTTCTCT 
CGTCGGCTTA TGCGTGAGCA TGTTTTAACG ACGAACGACT TGATTTACCC GATGTTTGTC
ATAGAAGGAC AAAACCGCCG TGAGCCGGTT AAATCCATGC CGGACATTGA ACGTTTGAGT
ATAGATCTAT TGATTACTGA AGCTCAAGAA CTTTTTGAAC TTGGCATCCC AATGATTGCG
CTTTTTCCAG TGCCAGATCC AGAAACCAAA TCTCTGGATG CAGCAGAAGC TTACAACCCG
GATGGATTAG CTCAAAGAGC CGTTCGCGCC CTTAAAGAAG CCATTCCAGA CATGGGCATT
ATGACGGACA TTGCCCTAGA CCCTTACACG ACACATGGTC AAGACGGTAT TATTGATGAA
AATGGTTATG TCCTGAATGA CGACACCATT GATGTACTCA TGCAACAAGC CATTTCACAC
GCTGAAGCTG GGGCAGATGT TGTGGCGCCA TCAGACATGA TGGATGGTCG AATCATAGAA
ATTCGTGAAC ATTTGGAAGA GCACGGTCAT ATCCATACCC GTATTATGGC TTACTCGGCG
AAGTACGCTT CGTCGTATTA TGGGCCATTC CGAGATGCAG TCGGTTCGGC GGGCAATTTA
GGCGCTGGTA ATAAACACAC CTATCAAATG GACCCAGCGA ACAGCAACGA AGCATTGCAT
GAGGTCGCGA TGGACATTAA CGAAGGCGCA GACATGGTAA TGATCAAGCC CGGCCTGCCA
TATCTTGATA TTGTTTATCG TGTGAAACAA GAATTCCAAG CCCCCACATT TGTCTACCAT
GTTAGCGGTG AATATGCCAT GCTCAAAGCA GCGGCTTTAA ATGGTTGGAT CAACGAAAAA
GACGTCGTCT TGGAGACCTT ATTAAGCTGT AAACGTGCAG GGGCAGACGG CATCCTGACC
TATTACGCCA AGGTCGTCGC ACAATGGTTA GCGGAAAAAT AA
 
Protein sequence
MIERQFPITR MRRMRKDPFS RRLMREHVLT TNDLIYPMFV IEGQNRREPV KSMPDIERLS 
IDLLITEAQE LFELGIPMIA LFPVPDPETK SLDAAEAYNP DGLAQRAVRA LKEAIPDMGI
MTDIALDPYT THGQDGIIDE NGYVLNDDTI DVLMQQAISH AEAGADVVAP SDMMDGRIIE
IREHLEEHGH IHTRIMAYSA KYASSYYGPF RDAVGSAGNL GAGNKHTYQM DPANSNEALH
EVAMDINEGA DMVMIKPGLP YLDIVYRVKQ EFQAPTFVYH VSGEYAMLKA AALNGWINEK
DVVLETLLSC KRAGADGILT YYAKVVAQWL AEK