| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0153 |
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| Symbol | |
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| ID | 3762445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 185412 |
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| End bp | 186245 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637784858 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_390423 |
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| Protein GI | 78484498 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0128088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGATT TATATGCCGT AGTGGGCAAC CCGATTGCCC ATTCAAAGTC GCCTCTGATC
CATCGTCTAT TTGCAGAACA AACCGATCAG GATCTGGTTT ATGAAGCGTT ATTGATCGAT
ACCGAAGACA CTACGTTTCA GTTTGCCATC TCCGACCTGA TCGCAAGAGG CTACCGAGGA
ATCAATATTA CCGTACCGTT TAAACTTGAC GCGTTTGAAC TAGCGGATGA ATTGAGCCCT
CGTGCTGAGG TAGCGCATGC CGTGAACACT TTCAGTTTTA AGGACGGTAA AATTTTTGGC
GACAACACGG ATGGCATTGG CTTAGTGACT GACATCGAAG AAAATGCCAA TCGTCCATTT
AAAGACCAGA AAGTTTTAAT ACTAGGAGCA GGCGGCGCTG TACAGGGTAT TTTGCAGCCA
TTACTGGAAA AACAACCAGG CCTGGTTCAC ATTGCCAATC GCACCGCCAA ACGAGCAGAA
GTGCTTGGAA AACGATTCGA AACCTTCTCA CCCATCACCA GCAGTGACTG GGAAGGCATT
CCCGACCAAG CTTATGACAT TATCATCAAC GGCACTTCGG CCAGCTTGGA AGGCAAACTG
CCCCCGATTA ATTCAAATGT AGTGGGACAG GACAGTCTAG TCTATGACAT GATGTACGGA
GCCGAACCGA CCATTTTCAT GCAATGGGCA CAGCAACACC AACCCTCTTG CCAAGTCAGA
GATGGATTGG GAATGCTGGT TGGACAAGCC GCCGAGGCTT TCTATATTTG GCGAGGCGTG
CGCCCCCAAA CGCAAAGCGT GATCGATGAA GTCCGTCGCT TAATTCAGGC CTGA
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| Protein sequence | MTDLYAVVGN PIAHSKSPLI HRLFAEQTDQ DLVYEALLID TEDTTFQFAI SDLIARGYRG
INITVPFKLD AFELADELSP RAEVAHAVNT FSFKDGKIFG DNTDGIGLVT DIEENANRPF
KDQKVLILGA GGAVQGILQP LLEKQPGLVH IANRTAKRAE VLGKRFETFS PITSSDWEGI
PDQAYDIIIN GTSASLEGKL PPINSNVVGQ DSLVYDMMYG AEPTIFMQWA QQHQPSCQVR
DGLGMLVGQA AEAFYIWRGV RPQTQSVIDE VRRLIQA
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