Gene Tcr_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0146 
Symbol 
ID3762438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp178021 
End bp178230 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content46% 
IMG OID637784851 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_390416 
Protein GI78484491 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCA TTACTGTCCA GATCAATGAT GAGATAAAGG CGATCCCCGC CTCGTTGTCT 
TTGACCGATC TGTTAAATCA GTTAGGCTAT CAAGAACACA ATTTTGCGGT TGCAATCAAT
GACGCTTTCG TACCACGCAG CCAATATGAA ACCACGCCGA TTCAAACCGA TGATCGCATC
GAAATTGTCG CCCCCATGCA AGGAGGTTAA
 
Protein sequence
MTTITVQIND EIKAIPASLS LTDLLNQLGY QEHNFAVAIN DAFVPRSQYE TTPIQTDDRI 
EIVAPMQGG