Gene Tcr_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0144 
Symbol 
ID3762436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp176514 
End bp177170 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID637784849 
Productthiamine-phosphate diphosphorylase 
Protein accessionYP_390414 
Protein GI78484489 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTCT TATCCTGCCA TTCCCCTGAA AAACCACTGG GAATTTACCC GCTGGTGGAC 
CGAGCCGATA AACTGCTTCC TTTTTTTGAC GCGGGCATCA CCACCGCTCA AATTCGTATA 
AAAGATTTAG ACGGTCAACC ATTAGAGCAG GAAATGGCGC AGGCGGACAC TCTAGCAAAG 
TCGTATCAAG CCAGGCTCTT CATCAATGAT TACTGGGAAA TGGCGCTTCA ACTCAACAGT 
TATGGCGTAC ATTTAGGTCA AGAAGATGTC TTGAAGGCTG ACTTACCGGC AATGCACCGA 
GCAGGGCTTC GACTGGGCGT TAGCACGCAT ACGCCTGAAG AAATTGCTTC GGCGTTAACA 
ATACAGCCCT CTTACATTGC TATCGGCCCC GTTTTCGAAA CCCAAAGCAA GCAATTACCT 
TATCCAACCA CCGGTTTAAA TAATTTACAC CACTGGGTGA AAACGTTGAA TGTCCCAGTG 
GTTGCCATTG GTGGTATTCA ACGGCATAAT CTGACTGACG TCATACTCGC TGGCGCGAAC 
GGTGTCGCCA TGATTAACGG GCTCAACCTG CCAGGCTGTA CGACAATGGA AAGTATACAC 
AAACTCATCC ATACCTTTGA TCAGGCTTAC CAAACAAGAG CATTGTCCTA TGGATAA
 
Protein sequence
MQFLSCHSPE KPLGIYPLVD RADKLLPFFD AGITTAQIRI KDLDGQPLEQ EMAQADTLAK 
SYQARLFIND YWEMALQLNS YGVHLGQEDV LKADLPAMHR AGLRLGVSTH TPEEIASALT 
IQPSYIAIGP VFETQSKQLP YPTTGLNNLH HWVKTLNVPV VAIGGIQRHN LTDVILAGAN 
GVAMINGLNL PGCTTMESIH KLIHTFDQAY QTRALSYG