Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0128 |
Symbol | uvrD |
ID | 3762497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 160678 |
End bp | 162903 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637784833 |
Product | DNA-dependent helicase II |
Protein accession | YP_390398 |
Protein GI | 78484473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000143952 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTT CACATATATT AAATGACTTA AATGATGCGC AACGTGACGC TGTTACGGTG GAAGATCAGC ACGCCTTAAT TTTGGCTGGC GCCGGCAGTG GTAAAACACG AGTTTTGGTG CATCGCATTG CCTGGTTGAC TCAGGTGATG GGGTTTTCAG CGTATAACAT TTTAGCCGTG ACCTTTACCA ATAAGGCGGC CAGCGAAATG CGTGCGCGAG TTGAAGCGTT GATCGGCAAT CAGTCACAAG GCATGACGAT GGGCACCTTT CATGGTATCG CTTATCGATT GCTCCGCACA CACTATAAAG AGGTTGGATT GCCACAGAGT TTTCAAATTC TGGATTCGGA TGACCAAAAG CGAGTGATTA AGCGCCTGTT AAAAGCGCTG GAGCTGGATG ACGCACAATG GCCTCACAAA CAAGTACAAG CTTTTATCAA TGGTGAAAAA GAAGAGGGAC GTCGTCCACA TCATATTGAC CCCGGCCACA ATCCTTACGT GCGTCAAATG GTGCAAATTT ATCAAGCGTA CGAAGAACAA TGTAAACGGG CAGGCCTGGT GGATTTTGCG GAGCTCTTAT TGCGAGCGCA TGAACTGTGG TTGAAAAACC CGCAAGTGTT AGCGCATTAT CAAGCCCGTT TTCGTCATAT TCTGGTGGAT GAGTTTCAAG ACACCAATAG CTTGCAATAT GCTTGGCTTC GGGTGTTGGC CGGTGCCAGC GGGCGGCTAT TCATTGTTGG AGATGACGAT CAGTCGATTT ATGGATGGCG TGGGGCCAAA ATTGAAAACA TTCGCCGCTT TGATGAAGAT TTTTCCGACG TCAAAACCGT TCGCTTGGAG CAGAACTATC GTTCCACCGG CACGATTCTT AAAGCCGCCA ATGGGTTGAT TGCTTTTAAC CAGGATCGCA TGGGCAAAAA TCTTTGGAGT GCGGGCGAGG AAGGCGACCC CATTCGCATC TATGAAGCCT TTAATGAGTT GGATGAAGCG CGTTATGTGT GCAACCAAGT TGAAAGTTGG TGTGAACAAG GTGGCAGCCG TTCGGAAGTT GCTGTTTTGT ATCGTTCCAA CGCACAATCT CGTGTGATGG AACAAGCGTT GTTGCAAGCG CAGATTCCGT ATCGCGTGTA TGGTGGCCTG CGCTTCTATG ATCGCGCCGA AATTAAAGAC GTGCTGGCGT ATTTACGATT GCTGGTCAAC ACCGAAGACG ATGCCGCTTT TGAGCGGGTT TATAACCACC CACCGCGAGG AATTGGGAAT AAAACCGCCG ATCAAATTCG AGAAGTGGCG CGCATGCAGG AAATTTCATT ATGGCAAGCC GCCACGCAAA TGGCGCAGGA TGGTTTGACC GCACGCGCAA AAACGGCCGT AAATGGTTTT TTATCTTTAA TCGAGTCGTT AAAAGACAGC ACGGCAGAAT TAACCTTGCA GGATCAGGTC ATTCAGGTGA TTTCGCGTTC CGGGTTGCAA TTGCATTTTG AAAAAGACAC CTCTGAACAA GGCCAAAGCC GTCTTGAAAA CCTAGACGAA CTGATTAATG CCGTGAGTGT GTTTAAACCG GTACAAGATA ATGACACTGT GGAAGGCGTC GTACCGGAAG AGGCGGCGAT GACCGAAGCG TTTGATCAAC CCAATTTTGA AAATCCACTG GCCGAGTTTT TGGCTCAAGC CGCTCTGGAA GCAGGCGAAC AACAGGCCGA TCAGTGGGAA TCTTCGGTTC AGTTGATGAC ATTGCATGCG GCGAAGGGTC TTGAGTTCCC ACTGGTGTTT ATGATTGGCT TGGAAGAGGG GCTTTTCCCA TCTCAGCAAT CACAGGAAGA CCCTTATCGT TTGGAAGAAG AGCGTCGTCT GGCTTATGTT GGGATAACAC GAGCCGAAAA GCAGTTAATG ATTTCCTTCG CCAATCGACG TCGAATGCAT GGTTCGGAAT TTTATCCGTT GCCTTCGCGG TTCATCAAAG AAATTCCGGA CGACTGCGTT CAAATGGTGC GTTTGAGTGG TTCGGTTAAA CATTATGGTG AGACTGCGTC GCATGCCAAT AAAGGGTTTG CATTACCGAA CGAATCCGGT TTTAGGGTGG GAGAAAATGT CTTTCATCAA AAATTTGGAG AAGGCACTGT GCTGGGAACC GAAGGCGCGG GCGACCATGC CCGTATTCAA GTCAACTTTA CGCATGCTGG CACGAAATGG TTAGTGGCGG CGTTTGCCAA ACTTGAGAAA CGTTAA
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Protein sequence | MDISHILNDL NDAQRDAVTV EDQHALILAG AGSGKTRVLV HRIAWLTQVM GFSAYNILAV TFTNKAASEM RARVEALIGN QSQGMTMGTF HGIAYRLLRT HYKEVGLPQS FQILDSDDQK RVIKRLLKAL ELDDAQWPHK QVQAFINGEK EEGRRPHHID PGHNPYVRQM VQIYQAYEEQ CKRAGLVDFA ELLLRAHELW LKNPQVLAHY QARFRHILVD EFQDTNSLQY AWLRVLAGAS GRLFIVGDDD QSIYGWRGAK IENIRRFDED FSDVKTVRLE QNYRSTGTIL KAANGLIAFN QDRMGKNLWS AGEEGDPIRI YEAFNELDEA RYVCNQVESW CEQGGSRSEV AVLYRSNAQS RVMEQALLQA QIPYRVYGGL RFYDRAEIKD VLAYLRLLVN TEDDAAFERV YNHPPRGIGN KTADQIREVA RMQEISLWQA ATQMAQDGLT ARAKTAVNGF LSLIESLKDS TAELTLQDQV IQVISRSGLQ LHFEKDTSEQ GQSRLENLDE LINAVSVFKP VQDNDTVEGV VPEEAAMTEA FDQPNFENPL AEFLAQAALE AGEQQADQWE SSVQLMTLHA AKGLEFPLVF MIGLEEGLFP SQQSQEDPYR LEEERRLAYV GITRAEKQLM ISFANRRRMH GSEFYPLPSR FIKEIPDDCV QMVRLSGSVK HYGETASHAN KGFALPNESG FRVGENVFHQ KFGEGTVLGT EGAGDHARIQ VNFTHAGTKW LVAAFAKLEK R
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