Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0123 |
Symbol | |
ID | 3762492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 155802 |
End bp | 156866 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637784828 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_390393 |
Protein GI | 78484468 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0180562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAGC TACAAAACGA CCGTTTCCTA CGTGCCCTAC TCAAAGAACC CGTTGATCAG ACTCCGGTTT GGATGATGCG CCAAGCAGGC CGCTATTTAC CAGAGTACCG CGCTACCCGA AAACAAGCAG GTTCTTTTAT GGATTTGTGC CGTAATAAGG AATTGGCGTG CGAAGTCACC TTGCAGCCAC TTGAACGTTA TCCGTTAGAT GCCGCTATCT TATTTTCTGA TATTTTGACG ATTCCAGATG CAATGGGATT GGAGTTACGT TTCCAGACAG GTGAAGGCCC TATTTTTGAT AAACCAATCA AAAGCATGTC CGATGCAAAA AAACTGTTCG TTCCGGATAT GGCCTCAGAG TTAGGGTATG TAATGGATGC TGTAAGCACT ATTCGTAAAG CATTAGACGG CCGCGTTCCT CTGATCGGAT TTTCGGGAAG CCCTTGGACC TTGGCGACTT ATATGGTCGA AGGCGGCTCC AGTAAAACGT TCGCGAAAAT CAAAGCGATG ATGTACGATC AGCCTGCCAC GCTCCATCAT ATTTTGGATG TTCTAGCCGA TTCGGTCATT GCTTATTTAA ATGCACAAAT CGAAGCCGGT GCGCAAGCGG TGCAGATTTT TGATACTTGG GGCGGCGTAT TGACCCCTCG TGACTACAAA GAGTTTTCAT TAAACTACAT GGCCAAGATC GTCGATGGTC TCAAGCGTGA AAACGATGGC CGTAAAGTGC CTGTGATTTT GTTCACAAAA GGCGGCGGTC AGTGGTTAGA ATCAATGGCA GAAACAGGCT GCGATGCCCT TGGGTTGGAT TGGACAACGG ATATTGATGA CGCTCGTGCA CGTGTGGGTG ATAAAGTCGC ACTGCAAGGT AACATGGATC CGAGTGTGTT ATATGCGTCT CCAGACAGAA TTCGAGAAGA AGTCGCAACC ATTTTAGAGA AATATGGCCA AGGAACAGGT CATGTCTTTA ACTTGGGTCA TGGCATCCAC CCTGAAATTG ATCCAGAACA TGCTGGAGCC TTTATCAAAG CCGTGACCGA GTTGAGCCCG AAATACCATA AGTAA
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Protein sequence | MAELQNDRFL RALLKEPVDQ TPVWMMRQAG RYLPEYRATR KQAGSFMDLC RNKELACEVT LQPLERYPLD AAILFSDILT IPDAMGLELR FQTGEGPIFD KPIKSMSDAK KLFVPDMASE LGYVMDAVST IRKALDGRVP LIGFSGSPWT LATYMVEGGS SKTFAKIKAM MYDQPATLHH ILDVLADSVI AYLNAQIEAG AQAVQIFDTW GGVLTPRDYK EFSLNYMAKI VDGLKRENDG RKVPVILFTK GGGQWLESMA ETGCDALGLD WTTDIDDARA RVGDKVALQG NMDPSVLYAS PDRIREEVAT ILEKYGQGTG HVFNLGHGIH PEIDPEHAGA FIKAVTELSP KYHK
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