| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0122 |
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| Symbol | |
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| ID | 3762491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 154508 |
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| End bp | 155710 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637784827 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_390392 |
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| Protein GI | 78484467 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000715595 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTCCC TTGTCGATAT TTATATTGGG CGTCAACCCA TTTTCGATCA TTCTGCCGAC
GTGTGGGCGT ATGAATTATT GTTTCGTTCG GGAGACGGGC AAAACAGCGC TCAAATTTCA
GGAGGAGATC ATGCCACGGC GCAAGTGATG CTGAATTTAT TTGGCGATAT GGGGTTAAAA
AATGTTGTTG GAGACCACAA AGCCTTTATT AACTTTACAG AAGGGCTGTT ATTGAATGAA
AACCAGCCTT TTTTTCCGCA TAATCAGGTG GTCATTGAGG TATTAGAAGA CGTTAAGGTC
TCCTCCGAAA TGATTGAGAG TTTAAAGAAG CTGCGGAAAT TAGGCTATAA AATTGCGTTA
GATGATTATA TTTTCAACCC TGAGTTAGCG GAATTTGAAA CCTGTGCCGA CTTTATTAAG
GTCGATATCC TTGAGGTGGG TCCTAAACAG TTGAAAGAAC ATATCGGCCG ACTCAAAGAC
CAGGGGATCA AGCTGTTAGC GGAAAAAGTC GAAACGAGAG AGCAGTTTGA ATTTTGCAAA
AAGATTGGCT TTGATTTGTT TCAGGGGTAT TTTTTTGCCA AACCTCAAAT TTTGAAAGGG
CGGACTTTAC CTTCGAATAA GCTCGCCATC ATTCAGTTGT TATCGCATGT TTATGATCCA
GACATTGATA TGTCGGTCCT GAGTGCGACC ATTGGTCAAG ACATCGCTCT ATGTCAGAAA
TTATTAAAAT TTGTTTCTGC GGTCGACAGC CGCACTCAAT TGAGTTCGAT TCATGATGCC
GTCATGCGCT TTGGGTTAAA ACGCTTGCAA AGTTGGGCCA GTATGTTGGT TTTGTCAAAA
GCCGATGATA AGCCAATGGA GTTGTTCAAA ACATCTTTAA TTCGTGCTAA GTTTTGCGAG
CTGGTTGGCA TTGCGGTAGG CGACCATTCG AAAGACAGTT ACTTTACAGT TGGTTTGTTT
TCTACTTTGG ATGCGTTAAT GGATACGCCT CTGCAAGAGC TGTTAGCGGA ATTGAATTTT
GATGACACCA TTAAACGGGC TTTATTGGAA CAGTCCGGGA GTTTAGGTGT CACGTTAGTG
GCCGCCAAAG GCATTGAACG AGGTCGAACG GACTTTGCGT TACCGCAAGG TATTTCCGCT
TCAGAGTTGT CCAAATTCTA TTTGGAAGCG ATGGAGTTCG CGAATAAGTT GGATTTAAGC
TAA
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| Protein sequence | MSSLVDIYIG RQPIFDHSAD VWAYELLFRS GDGQNSAQIS GGDHATAQVM LNLFGDMGLK
NVVGDHKAFI NFTEGLLLNE NQPFFPHNQV VIEVLEDVKV SSEMIESLKK LRKLGYKIAL
DDYIFNPELA EFETCADFIK VDILEVGPKQ LKEHIGRLKD QGIKLLAEKV ETREQFEFCK
KIGFDLFQGY FFAKPQILKG RTLPSNKLAI IQLLSHVYDP DIDMSVLSAT IGQDIALCQK
LLKFVSAVDS RTQLSSIHDA VMRFGLKRLQ SWASMLVLSK ADDKPMELFK TSLIRAKFCE
LVGIAVGDHS KDSYFTVGLF STLDALMDTP LQELLAELNF DDTIKRALLE QSGSLGVTLV
AAKGIERGRT DFALPQGISA SELSKFYLEA MEFANKLDLS
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