| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0118 |
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| Symbol | |
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| ID | 3762526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 149838 |
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| End bp | 152126 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637784823 |
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| Product | AsmA |
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| Protein accession | YP_390388 |
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| Protein GI | 78484463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.413911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA AACCGGATTC AACGCTTGAA GAAAAGGTAA CGGAAACAAC TGATCAGCCG
GACTTGCCGC CTGAGAAAAA AGTGTATTCT GACGATCATG TCTGTCCTAT AAAAGAACAG
CGAATGGCCA AGCGAAGAGG CAAGCCTGCG CACCCTGTCG TTAAATGGTC CAGCCGGATT
GTTATGGTAC TGGCGATTAT TCCGATTATT TTGGTGCTGG CTTTTATTGG TGCCGTTAAT
TTTATGGACT ACAACCAATA TAAACCCCAA ATTGAATCGG AATTCCAGAA GCGGACGGGT
TATGCATTAA AAATTAATGG CCCCATTGAC GTCTCTGTCT GGCCTTTTGC GTTAGAAGCC
AAGCAGGTTG AGCTTAAAAA TAGACCTTCG TTTAACTCGC CAAATTTAGC TCAAATTGAC
AGTATTCAAG TTGAATTGTC GTTATGGAAC CTCTTTGTCA ATCGTCACTT AGAACTCTTG
GGGGTGGAGC TGGAAAAGCC ACATTTGTTT TTGGAAACCA ATGCCGCAGG TCAGCATAAT
TGGGGCTTGT TACAGAAACA GTTGGCGATG ACAGCACAAC AACCGCAATC GCCTCATTTA
CGAAAAGTGG CTTATCAAGT TGTGACCACA CCTGTAGCAG CGCCCTCTGA CAAATCACCA
GAGCTTGTGG ATTGGCACCT TGACAGCTTC GTACTGCAAA ATGCCATCAT TGAGTGGCAA
AATGAGCAGG CGCAGACGCA CCTGGCCATG GAGGATTTTG ATCTGATGGC GTTTGACATC
TCCCCAAATC AGTCTTTTAA GGTACTCACC AATTTTCAAT ACGACTCATC TGAAATTAAG
TCCGGTTTCC ATTTTAATGT CGCGTCTATG TTGATGGTAA ACAACCGCTT TTCTCAATGG
ACACTATCCG ATTGGACAGG TAATGTTCGG CTGGTGTTGC CGAAAACAAT GCAAATTCCA
GAAGTACGCG TTGAGCTGGT CGGAGATCTT TTTGAATTGA ATTTTGATCA ACAAAGGTTT
CATGTGGAAC AGGCTCGATT CCGTTCATTA AAAGGAAGTT TAGAGACATC AATGTCCGGA
ACTTATGGAC GCAACGCTGA AACGCAGGGT GACTTAAAAG CCATTCATAT CAATTTGCGT
AAATGGTTCC GCCACTCTGG TGTGAGCTTT CCGAATTTTG TGGATAAAAC GGTTTTAAGA
GATGTTTCTG CAGAATTTAA TTGGTCTCAA ACGCCTGAAC AATTCTCGGT TGAGAATCTC
GCTGTTCAAT TGGATCAATC AAAGATAACA GGGGATATTT GGCGCAAACA ACTGACAGAA
AAGCCACAAT ATCGATTTGA TTTAGCCATT TCCGAACTGA ATTTGGACCG TTATGAAGCC
TACGTTGATT CGAAAAACGC AACCCAATCG GTGCAGAAAG AGGCTAAGAC CGTGTCAAGC
GCACCTAACG CAACGAAATC TGATCCACTA GCTACTGCAA GGCCGGGCAA AGAAACCTAT
TTACCCGTTG GATTGCCGAT CACAACGCTC AGAGGATTAC AGGCCGAAGG GCATCTTCAT
ATTGCGAAGT TAAAAGCGTG GCAGATGCAG ATGCAAGAGT TTGAAGTGAA TCTGTCAGCC
AATGCCGGCA AACTTCAACT TGCGCCTTTG GATGCGAATT TATACCAGGG CACATTGCGT
TCCAAATTGT TGGTCGATGT GACAGGCAAA ACGCCTCATT ATGATTGGTC TGGCAGAATG
GAAGGTGTTC AGCTTAAGCC TTTCTTAATC GATGGATGGC AATATGAGTT GCTTGAAGGT
CAATACGACA GTACGTTTCA CTTTAACACC TTAGGTGTGA ATAGCTTCTT GCTGAAACAG
AATTTGAATG GGTCTTTTAA TGCCAATGTT CAAAAAGGTC GGTTTAAAGG AATGGACTTG
AATAAATTGT TGTCAGGGCA AAAAACCAGC GCGAAAGATG CCACAGAATT CAGCCAGTTA
TCCATGGTGG GAGACATTCA GTCAGGAGTG ATGGCCTTAC GACGTATGAA TGTGAAAAGC
GATCGTTTTT CAGCCATTGG CACTGGACAA TTGGCCTTGC CGACCGCCCA GTTAAATGCA
GTACTGCATA CGACCTATCA TCGTCCACCA CACAGACTTC AACAGTTGAA AGGAGTGGAA
GTGCCGGTAC ACTTGAAAGG GACGTTAGGA AACGTGCAAT GGTCTGTCGA TCTTAAAAAA
TTGTTAAGTA ATCCAGCCAA TCAACAAAAA CTGTTGAACA GCTTGCAGCA ATTTTTGAAG
GCTTCATAA
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| Protein sequence | MEKKPDSTLE EKVTETTDQP DLPPEKKVYS DDHVCPIKEQ RMAKRRGKPA HPVVKWSSRI
VMVLAIIPII LVLAFIGAVN FMDYNQYKPQ IESEFQKRTG YALKINGPID VSVWPFALEA
KQVELKNRPS FNSPNLAQID SIQVELSLWN LFVNRHLELL GVELEKPHLF LETNAAGQHN
WGLLQKQLAM TAQQPQSPHL RKVAYQVVTT PVAAPSDKSP ELVDWHLDSF VLQNAIIEWQ
NEQAQTHLAM EDFDLMAFDI SPNQSFKVLT NFQYDSSEIK SGFHFNVASM LMVNNRFSQW
TLSDWTGNVR LVLPKTMQIP EVRVELVGDL FELNFDQQRF HVEQARFRSL KGSLETSMSG
TYGRNAETQG DLKAIHINLR KWFRHSGVSF PNFVDKTVLR DVSAEFNWSQ TPEQFSVENL
AVQLDQSKIT GDIWRKQLTE KPQYRFDLAI SELNLDRYEA YVDSKNATQS VQKEAKTVSS
APNATKSDPL ATARPGKETY LPVGLPITTL RGLQAEGHLH IAKLKAWQMQ MQEFEVNLSA
NAGKLQLAPL DANLYQGTLR SKLLVDVTGK TPHYDWSGRM EGVQLKPFLI DGWQYELLEG
QYDSTFHFNT LGVNSFLLKQ NLNGSFNANV QKGRFKGMDL NKLLSGQKTS AKDATEFSQL
SMVGDIQSGV MALRRMNVKS DRFSAIGTGQ LALPTAQLNA VLHTTYHRPP HRLQQLKGVE
VPVHLKGTLG NVQWSVDLKK LLSNPANQQK LLNSLQQFLK AS
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