| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0112 |
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| Symbol | |
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| ID | 3762520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 142550 |
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| End bp | 143479 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637784817 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_390382 |
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| Protein GI | 78484457 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA CTCTCAGAAT CGCAACACGT AAAAGCCCTT TAGCCATGTG GCAAGCCGAA
TTTGTCAAAG CAGAGCTTGA GAAACATCAC GAAGGATTAA CGGTAGAGCT GCTGCCGATG
TCAACGAAAG GGGACAAAAT TTTAGATGTT CCTTTAGCCA AAATCGGTGG TAAAGGGTTG
TTTACCAAAG AGCTTGAAGA TCGCATGCTC GCCGGTGAAG CTGATATTGC GGTTCACTCG
ATGAAAGATG TGCCTATGGT GTTACCAGAA GGGTTCGCTT TAGGCGCCAT TTTGGAGCGC
CATGAACCGA CAGATGCCTT TGTTTCCAAT GATTATGCTC ATTTTGAAGA GCTGCCACAA
GGTGCTGTAC TGGGCACGTC AAGCCTAAGA CGGAAAGCTC AATTGATGGC TGCACGTCCA
GATTTGGTGG TGAAAGACTT GCGGGGCAAT GTTGGAACGC GTTTAGGAAA ATTGGATGCC
GGTGACTATG ATGCCATCGT GCTGGCAACG TCCGGATTAA AACGGTTGGA ACTGGATGAG
CGTATCCGTC ATGAGTTGTC GCCGGAAACC TGTTTACCTG CTGTGTCTCA AGGTACATTG
GGCATTGAAT ACTTTGAAAA AGACCCAGAA GTACTAGAGC TTATTCAGGT ATTGAACCAT
CGGGATACGG AAATTCGTAC CTTGGCCGAA AGAGCAATGA ACCATCGCTT GGAAGGTGGT
TGTCAGGTGC CAATCGGTGT TTATGCTGAA TTAGAAGACG ATCAGATTTA TTTACGCGGA
CTGGTCGGTG CTTTAGACGG CTCCGAAATT TTGCGATCTG AAGCCAGAGG ATCGCAAAAA
GACCCGGAAA CACTGGGTGT TTATGTCGCT GAGCAATTAT TGGAGCAAGG CGCAGGTGAG
ATTTTAAAAG AAGTGTATGA CCAAGCCTGA
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| Protein sequence | MKKTLRIATR KSPLAMWQAE FVKAELEKHH EGLTVELLPM STKGDKILDV PLAKIGGKGL
FTKELEDRML AGEADIAVHS MKDVPMVLPE GFALGAILER HEPTDAFVSN DYAHFEELPQ
GAVLGTSSLR RKAQLMAARP DLVVKDLRGN VGTRLGKLDA GDYDAIVLAT SGLKRLELDE
RIRHELSPET CLPAVSQGTL GIEYFEKDPE VLELIQVLNH RDTEIRTLAE RAMNHRLEGG
CQVPIGVYAE LEDDQIYLRG LVGALDGSEI LRSEARGSQK DPETLGVYVA EQLLEQGAGE
ILKEVYDQA
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