Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0096 |
Symbol | |
ID | 3762230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 123215 |
End bp | 124225 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637784801 |
Product | hypothetical protein |
Protein accession | YP_390366 |
Protein GI | 78484441 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGTA GCGCTTCAAT GCGATTGTCT TCAATGTGGG CTTCTGCAAA GAGTTGGTTC GATCAGGCCG CCTCCGATTC TTTGACTCCT CAGATTCAGG CGCCTATTCT CTCTGAACAG CAAATTCATG CACTGGGAGA TGAGGTGTCA CAGATCGTTG CTAAGCCCGT TGCCAACCCA AAAGCCAGTG ATGCGCGAAA ACAAGGTGAA CAGGCCAGTC GCTATCTTGG TTCGGGCATG GAATATGAAG AAAGTCGTCG GTATCAACCG GGGGATGAAG TGCGGCGCAT CAACTGGCGT CTAATGGCAC GAACCGGTCA AGCCCATACC AAATTATTTC AAGAAGAACG TCAAGAAAGC TGGACACTGC TTTTGGATCA ACGACAGTCG ATGCGGTTTG GCACACGGCA TTATCTTAAA GTGGTACAAG CCGCAAGAGC CGCCGGGTTT TTTGCCTGGC AGGCGCAGCA ATCCGGGTTG CCGGTTGAAG GTATTGCGCT CTCTGAACAA ATTCGAAATT CAGCAACTTT TGAAGGCAAT GGAACGTTTG AGCGATTTAT GGAGTTCGCT TCAGTCGCTT GTCCTCCCTT GGCGGTGATA CAAGAATCAC GTTTGTATGA TGAGTTATTG GTCTGCCAGC AACGCTTACA ATCCGGCGAT AGATTGATTA TTTTGAGTGA TTTTAAAGAT CTCGATGATG CGACGTTGCA ACTGTTAGCC GCATTGCAGG ATAAAATCAT GATAAAGGCC GTATTGATCT ATGACCCTGT TGAAAAGCGG TTGCCGTCAT TACCTGGTTT GAAGCTGCAG TCTTTAAATG GCGAGTTTGA GGTGTCTCAA TTATCAGCGC AACAGTCGAA AGCGTATCAA AAATGGTCAG AACAGTATTT TGATCATAAG ATTCAGCGCT TGAATCAGGT GGGAGTGACC GTCGTGAGTT TGTCTACTGT GGACTCTTTG CAGGTGTTGA ATGATCAACT CCATGTGGGA GGGGTGTATG CCAGATCCTA G
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Protein sequence | MMRSASMRLS SMWASAKSWF DQAASDSLTP QIQAPILSEQ QIHALGDEVS QIVAKPVANP KASDARKQGE QASRYLGSGM EYEESRRYQP GDEVRRINWR LMARTGQAHT KLFQEERQES WTLLLDQRQS MRFGTRHYLK VVQAARAAGF FAWQAQQSGL PVEGIALSEQ IRNSATFEGN GTFERFMEFA SVACPPLAVI QESRLYDELL VCQQRLQSGD RLIILSDFKD LDDATLQLLA ALQDKIMIKA VLIYDPVEKR LPSLPGLKLQ SLNGEFEVSQ LSAQQSKAYQ KWSEQYFDHK IQRLNQVGVT VVSLSTVDSL QVLNDQLHVG GVYARS
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