| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0084 |
|---|
| Symbol | |
|---|
| ID | 3762218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 108554 |
|---|
| End bp | 109333 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637784789 |
|---|
| Product | SmtA protein |
|---|
| Protein accession | YP_390354 |
|---|
| Protein GI | 78484429 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAGGC AAGATCGAAA TTTTGATAAG TTAGTCGATA AATTTGAGAA AAAGGTCTAT
GACACGGTTA AGGGTGAGTG GCGTTTAAAA CTTCTCAAAG AAGATCTAAC CCCCCTGAAA
AAAGGAAATA AACTCTCCAT TTGGGATGCT GGCTGCGGCT TTGCTCAGAT CAGTCAGTGG
CTAGCTGAAT CAGGTCATCG CTTGACCTTA TGTGATTTAT CCCATCAAAT GTTGTTGCGA
GCAAAAGCTA ATTTTGCACA AGCTGATTTG TTTGCCGAGT TTATTGAGGG GCCTGTTCAA
GAGGTCGCAA AACAGATAGA ACCACAAGAT TTAGTCCTAT TTCACGCAGT TTTAGAATGG
TTAGCTCAAC CTGAGGAAAC TCTAAAAATA GTTACTGAAC AAGTCAAACC AGGCGGTTAT
CTTTCATTAC TATTTTACAA CCGAAATTCA GTAGTTATCA ATAACACATT AAAAGGTAAG
TGGCGTTTGC CTTTCATTCT TGAAGATGCT TATCTTAATA AGGGTAAAAA ACTCACACCA
CCGAATCCGC AGATCCCAGA AGTAGTTTGT CAGTGGCTCC AAGATTGGGG GTTTAAGATT
GAAATCCATA CCGGAATCCG CGTGTTCCAT GACTATATGA CGCGTGAAGT TCTTGAACAG
AGCGAAATGG AAGACTTGAT GGCTTTGGAA TATCGTTTCT GCCGTGAACC CACTTACCGT
AATATGGCGC GTTATATCCA TATTCTTGCC AAGAAAAAAG ATAGTTTCGG TACTTTATGA
|
|---|
| Protein sequence | MVRQDRNFDK LVDKFEKKVY DTVKGEWRLK LLKEDLTPLK KGNKLSIWDA GCGFAQISQW
LAESGHRLTL CDLSHQMLLR AKANFAQADL FAEFIEGPVQ EVAKQIEPQD LVLFHAVLEW
LAQPEETLKI VTEQVKPGGY LSLLFYNRNS VVINNTLKGK WRLPFILEDA YLNKGKKLTP
PNPQIPEVVC QWLQDWGFKI EIHTGIRVFH DYMTREVLEQ SEMEDLMALE YRFCREPTYR
NMARYIHILA KKKDSFGTL
|
|---|
| |