Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0080 |
Symbol | |
ID | 3761465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 101684 |
End bp | 102817 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637784786 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_390351 |
Protein GI | 78484426 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTC GCCAATTTCT TGCCCTATTG TCCAGCACTG GATTGGTGTC CGCCTGCACC GTGACCGAAG TTCGGCGTGG TATCAACTCG GCTCAACAAC TCTCAAATGG TGATGTTCCG GGTGCTGTCA GCGCACAACT TCCTTCCAGC GGCATCGCAG AAGTGGATCA ACTGGTACGT CGTCAACTTA AAACCTTAAT CCAGGAATTA GCGAAGACCT GGGGCGACAA AAAGGTAGCC AGTCCTAAAG AATACGTTAA GTACACCGAT CAATATCAAA GCCGAGCCAT CGTCAACTTT AAAACCGGGC TGATCCGAGT GGAGACGGTT GAACAAAAGT CCCCCAAAAG TGCGTTAAAA GCCGCCATCA TCAGCACGCT TCTGACGCCG GAAAACCCCG CCAAGGTCGA CCTTTTATCC GATGAAGCGG TGACAACCGG TCAAAAACCT TTTTTACATG ATTTGGTTAT CGACCAAGAT AAAAAAGCCG TCGGTACCCA GTGGCGTGCC AACCGTTATG CCGAGTATTT GATGAAGACC GCTTACAAAG TGGATTCTTA TAACCAGAAA ACACGCCATT ATGTGACCTT TGCAATGGTC AAAGGTCACA ACCAGACACA ACAAAAGCAC TATGCCACTC AAGTGAAACG CCAGGGAAAA CGCTTCAATA TTGATCAAGC TTTGATCTAT GCCATTATTG AAACCGAAAG CGCCTTTAAC CCTTACGCCA TGAGTCACAT CCCGGCGTAT GGACTGATGC AGATTGTGCC ATCTTCGGCG GGGCGCGATG CTCATCGATT GCTATACAAA AAAGACGGCA TTCCGACCAA AAACTATCTC TTTCAGGCCG ACAACAACAT TGAGATGGGC ACAGCGTATC TTCATATCTT ATTTACACGC TATTTGGCTC AAGTCAAAAA CCCAAAAGCG CGGGAATATT GTTGCATTGC AGCCTACAAC ACCGGCAGTG GTAATGTGCT TAAAGCGTTT GACACAGACC GCTCTAGAGC GTTTGATAAA ATCAACACCT TAAGTGCTTC CTCGGTTTAC AGCCATTTGC GCAAACATCT GAAATATGAA GAAGCCCGTC ACTATCTCTA CAAAGTCACG CAAAAGAAAC GCGCTTATGT TTAA
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Protein sequence | MKRRQFLALL SSTGLVSACT VTEVRRGINS AQQLSNGDVP GAVSAQLPSS GIAEVDQLVR RQLKTLIQEL AKTWGDKKVA SPKEYVKYTD QYQSRAIVNF KTGLIRVETV EQKSPKSALK AAIISTLLTP ENPAKVDLLS DEAVTTGQKP FLHDLVIDQD KKAVGTQWRA NRYAEYLMKT AYKVDSYNQK TRHYVTFAMV KGHNQTQQKH YATQVKRQGK RFNIDQALIY AIIETESAFN PYAMSHIPAY GLMQIVPSSA GRDAHRLLYK KDGIPTKNYL FQADNNIEMG TAYLHILFTR YLAQVKNPKA REYCCIAAYN TGSGNVLKAF DTDRSRAFDK INTLSASSVY SHLRKHLKYE EARHYLYKVT QKKRAYV
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