Gene Tcr_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0069 
Symbol 
ID3761454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp85957 
End bp87246 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content42% 
IMG OID637784775 
Productmajor facilitator transporter 
Protein accessionYP_390340 
Protein GI78484415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAT CGGCTTTTTT TTCAAAGCGT TTTTTTCCGT TATTTTGGGT GCAGTTTTTA 
GGCGCATTTA ACGATAACCT TTTTAAAAAC GCTTTGGTCA TGCTTATCAC CTTCCGGTTG
GCGGACACCG CAGAAGAGGC TGGGCTGTTA ATTACGTTGG CCGCCGGCCT TTTCATCTTA
CCGTTTTTTT TATTTTCTGC TTTTGCGGGG CAATTGGCGG ATAAATATGA AAAAACCACT
CTCATTCGTA AAATTAAATT AAGCGAAATT CTTATTATGT TGTTGGGCGC CACGGCATTG
GTTGCACAGG ACATGATGTT TTTATTTGCG GTTTTATTTT TGATGGGAGT TCAATCAGCT
TTTTTTGGGC CGATTAAGTA CGCTATCTTG CCAGAACATC TGGAAGACCA TGAGTTATTG
GATGGGAACG GTTGGTTCAG TGCGTCAACG TTTGTGGCGA TTTTGTTAGG CACCATTGTC
GGCGGTTGGG TGGTGCTGAC GGACGATGGT GAAACGGGCA TGGCCATTGG TGTTTTAATC
ATTGCTTTGC TAGGCTATGT CGCGAGTCGT TTCGTACCAA CCAGTGCATC AGGCGATGCA
ACTTTGCCGT TGCAATGGAA TATTTTGACC AATACCTACC AGGAGTTGGA GCTTCGAAAA
GATTTTCCGC AGGCGTTTTT TGCCGTTTTA TCCATTTCAT GGTTTTGGTT TCTGGGTGCC
ACTTATTTAA GTCAGATGCC GGTGTTGGTG TCAGACTACC TGTCTGGGAA TGACAAAGTG
GTTTTATTGT TCCTTGCGGT TTTTTCAATT GGTATAGCAT TAGGTGCTTG GATCGCCAGT
CAGCTTAAAA CCCCTGTCAG AACCATTAAA AACGTGCAAT GGCTGGTGTT GCTACTGGTC
GGCATTTCGT TGATGATATT ATTGGGCAAT GGTTTACTCA GTCAGGTTAA CAAAACAAAT
CAATTAATGG GCGTGATGGC CTTTTTACAG CATTGGGATT ATGTGATCAT CTTGTTGAGT
ATGTTGGCTA TTTCTACTCT GGGAGGATGG TTTATTGTCC CTTTGTATAC CTTGCTTCAA
GTACAGACAC AGCAACATTT TCGTTCAAGA ATGGTGGCGG TTAACAATAT TACCAATGCC
ATTTTTATGG TACTTTCGGC CGTTTTTATT ATGGTGTTGT ACGCATTTGA ATTATCATTA
ATCACTATTC TGTATGGTGT CAGTTTATTG AATTTAGCGG TGGCTTATTG GTATTTGCGC
CGCAGTCGAG TTATTAGAGA GAGGACTTAG
 
Protein sequence
MKASAFFSKR FFPLFWVQFL GAFNDNLFKN ALVMLITFRL ADTAEEAGLL ITLAAGLFIL 
PFFLFSAFAG QLADKYEKTT LIRKIKLSEI LIMLLGATAL VAQDMMFLFA VLFLMGVQSA
FFGPIKYAIL PEHLEDHELL DGNGWFSAST FVAILLGTIV GGWVVLTDDG ETGMAIGVLI
IALLGYVASR FVPTSASGDA TLPLQWNILT NTYQELELRK DFPQAFFAVL SISWFWFLGA
TYLSQMPVLV SDYLSGNDKV VLLFLAVFSI GIALGAWIAS QLKTPVRTIK NVQWLVLLLV
GISLMILLGN GLLSQVNKTN QLMGVMAFLQ HWDYVIILLS MLAISTLGGW FIVPLYTLLQ
VQTQQHFRSR MVAVNNITNA IFMVLSAVFI MVLYAFELSL ITILYGVSLL NLAVAYWYLR
RSRVIRERT