Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0049 |
Symbol | |
ID | 3762203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 60490 |
End bp | 61665 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637784755 |
Product | cytochrome c assembly protein |
Protein accession | YP_390320 |
Protein GI | 78484395 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00321304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACAA TGAATTCTTC TATGGAAATG GATCAATTAA AAAAGCCTTT TTCCATAAGT GATATTATCT GGGCAGTCTT AGTCATTGCT GGAGCAGCTT ATGCCTGGCT AAGTTTTGGC TCATTAATGG ATGCTTACGA AGTAGGAATC TTAGTGGGTA CATCTGTCGG TCTGATTGCT TTAGGAAAAA TCTGGCCAAG TATCAAAACA TTGTCTTATG CGGTGGCCGC ATTAAGTTTA CTGGCCTTGT GGACCTACAG TCATCATGGC AACCAAATCT CTGCCAATGA ACAAGCGTTC TTTTTAAAGT TCTTAATTTC GAGCCAATCC GCTTTTATGT GGATGAGTGC GTTATTCGTA TTGGCAACAG TTGCTTATTT TTTAGCGCTG TTTTCTAAAT CAAATTATGT TGGTAAAGTA GCCAGTGCCA TTGCGTGGTC AGGTGTTGCT TTTGGACTGG TTGGCATGAT GGTTCGCTGG CGCGAATCTT ATCTCATCAA CCCAGATTAC GGTCATATTC CGGTCAGCAG TCTATATGAA GTCTTTATCT TATTTGCGGT ACTGACAACC CTAATTTATT TGTATTACGA ACAAAAATTG CGTACCCGTT CAATGGGTGG ATTTGTCATG CTGATTGTCA GTGCCTCAAT TGCTTTCTTA CTTTGGTATA CCTTTGATCG TGAAGCACAC GTGATTCAAC CATTGGTACC GGCATTAAAA AGTTATTGGA TGAAAATTCA TGTCCCTGCC AATTTCGTTG GGTATGGTGC TTTTTCAATC GCGGCCATGG TCGGTTTAGC TTACTTAATC ACTGAAAAAT TCCAAACCAA AAATCCTAAT TCACAATTTG TGAAATCGAT GCCTAGCTTG GAAAGCATGG ATGATCTAAT GTACAAAACC GTTGCATTAG GCTTTGCTTT TTTTACCATT GCAACCGTTT TGGGCGCAAT GTGGGCCGCC GAAGCATGGG GTGGTTATTG GTCTTGGGAT CCAAAAGAAA CTTGGGCTCT GATTGTTTGG TTAAACTATG CTGCTTGGTT ACATATTCGT ATGTCAAAAG GCTGGCGTGG TCGTCCAATG GCATTATGGG CTCTAGTCGG TTTATTAGTA ACCACATTTG CTTTCTTAGG CGTCAATATG TTCCTATCCG GTCTTCATTC GTACGGTGAG CTTTAA
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Protein sequence | MSTMNSSMEM DQLKKPFSIS DIIWAVLVIA GAAYAWLSFG SLMDAYEVGI LVGTSVGLIA LGKIWPSIKT LSYAVAALSL LALWTYSHHG NQISANEQAF FLKFLISSQS AFMWMSALFV LATVAYFLAL FSKSNYVGKV ASAIAWSGVA FGLVGMMVRW RESYLINPDY GHIPVSSLYE VFILFAVLTT LIYLYYEQKL RTRSMGGFVM LIVSASIAFL LWYTFDREAH VIQPLVPALK SYWMKIHVPA NFVGYGAFSI AAMVGLAYLI TEKFQTKNPN SQFVKSMPSL ESMDDLMYKT VALGFAFFTI ATVLGAMWAA EAWGGYWSWD PKETWALIVW LNYAAWLHIR MSKGWRGRPM ALWALVGLLV TTFAFLGVNM FLSGLHSYGE L
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