Gene Tcr_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0046 
Symbol 
ID3762200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp56983 
End bp57711 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content41% 
IMG OID637784752 
Producthypothetical protein 
Protein accessionYP_390317 
Protein GI78484392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000000000325595 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAA AACTCAGTTT CATAGGATTA ATTTTTCCTG CCTTAGCGTC AGCAGGGACA 
AATAACATTG ATTATTTAAA CTTTGACAGC CAATCTCAAT TCAAAGAATT TGCAAAAGAC 
CTGACCGGTG CTTTGTCTGT GAAAACACTG GAACCCGCTG AACCTCTAGG GATTTCAGGA 
TTTGATATTG GAATTTCTTA TAATTTATCG CAATTTAAAT ACGATCATAT GGACCGTGTT 
TCAAATAACG GTAAATCGTC TTTAGACACC TTTACCATTC ACGCCGTCAA AGGCCTGCCT 
TTTGGGGTTG ATTTTGGCTT AAATTACAGC AAATCACCCA GCAGCAACAT TGAAACCTGG 
GGCGGAAAGA TCAGCTATGC TTTAATTGAA GGGGGTGCTT TATACCCAGC GATTGGCATC 
AGTGGTAATT ATGCTCAAAC CAGTGGTATC GATGCATTGA AGTTTAATAG CTACGGTGCA 
GAAGTCGGTG TTTCAAAAGG CTTTGCAAAT TTCACACCTT ATGCCGCTGT AGGAATGGTC 
AATGGGGAAA CCAAACCTGA AGAACTAAAT TTAGGCCTGG CAGGCCCGAA CCTTAAAAAT 
GAATCGGTTT CAATGGCGAA GTTTGCTGTT GGGGTCAACA TTAACTTATT GTTAATGGAC 
GTTCTCGTTG GTTATAACCA AGTTGGGGAA GTCGGAACCT ACTCCTTAAA AGCCGGTTAT 
CGCTTTTAA
 
Protein sequence
MLKKLSFIGL IFPALASAGT NNIDYLNFDS QSQFKEFAKD LTGALSVKTL EPAEPLGISG 
FDIGISYNLS QFKYDHMDRV SNNGKSSLDT FTIHAVKGLP FGVDFGLNYS KSPSSNIETW 
GGKISYALIE GGALYPAIGI SGNYAQTSGI DALKFNSYGA EVGVSKGFAN FTPYAAVGMV 
NGETKPEELN LGLAGPNLKN ESVSMAKFAV GVNINLLLMD VLVGYNQVGE VGTYSLKAGY 
RF