Gene Tcr_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0041 
Symbol 
ID3760367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp50074 
End bp50718 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content47% 
IMG OID637784747 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_390312 
Protein GI78484387 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTTA AATTAACCGA TTCAATCATG GATCAACTGT TAGATGCGTT GGTTGAAAAA 
GGCTGGTTTG AATGGCCACA TGCCGTGACG GATGAACTTT GTCAACAATT ACTGATTGAA 
GCCGAACAGC ATGATGATCA AGGCAATCTG CAGCGCGCCG GCATCGGTCG CGGAGAAGTG 
CATCAACTCA ACACAGACAT TCGCCGCGAT CAAATCAAAT GGTTGGACGG CGCTTCAACC 
GCCCAGCAAA CTTACTTCAA ACAAATGGCT GAGCTGCAAT ATCAACTGAA CCGTGCCTTA 
TTTCTAGGGT TGTTTGAATA TGAATGTCAT TTCGCCGTAT ACAAAGCCGG TGCTTTCTAT 
AAAAAACACC TTGATAGCTT TCGTGGACGC GCCAACCGAA TGGTTACCAC CGTGCTTTAT 
CTAAATCCTG GCTGGCAGAC GGACTGGGGC GGTGAACTGG TTATTTATAA TGAAGATTCT 
TCTGAAAAAC TGGCCACCGT AGCACCCGAA ATGGGTAAGC TGGTGGTATT CATGAGCGAA 
CAAATTCCGC ACGAAGTGCT TCCAACCCAA CAAGCTCGCA TGAGCATTGC TGGCTGGTTC 
CGCTGTAATA ACAGCATTGC CGGGCAGATT GATCCTGCGA AATAA
 
Protein sequence
MALKLTDSIM DQLLDALVEK GWFEWPHAVT DELCQQLLIE AEQHDDQGNL QRAGIGRGEV 
HQLNTDIRRD QIKWLDGAST AQQTYFKQMA ELQYQLNRAL FLGLFEYECH FAVYKAGAFY 
KKHLDSFRGR ANRMVTTVLY LNPGWQTDWG GELVIYNEDS SEKLATVAPE MGKLVVFMSE 
QIPHEVLPTQ QARMSIAGWF RCNNSIAGQI DPAK