Gene Tcr_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0039 
Symbol 
ID3760365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp48617 
End bp49156 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content42% 
IMG OID637784745 
ProductOsmC-like protein 
Protein accessionYP_390310 
Protein GI78484385 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAG TATATGTTCC TTCCTGTTTA CGTCCGATTG ATACAGATGG ATTGAATAAG 
TTAGCCGAAG CTGGAAAAGC AGCGCCTGAT ACTATTAAAA CCTTGAAGTC AAAAACGGTT
TTAGAAGGCC AGTTTAAAAA TTTTAACTAT GTACGTGATT TGGATCCAGT TGTCGTTGAT
GAGCCGCCTG TCTTACTGGG TGAAGATACG GCACCCAACC CTTCTGAGAT GGCTTTGTTA
TCTTTAGGCT CTTGTTTATC TGTTGGGGTG CAAGCCAATG CAAGTGCTCG TGGTATTAAC
CTAAACAAAC TAGAAATTGA TCTGGAAGGG GATATTAATA TCACCGCAGT TTGGGGAACG
GGCGATGTTG ATCCAAACAA AAAGCTAGGT GTGACAGAAG TTCGAGCATT TTTCACGATT
GAAGCTCCCG GATCCTCTCA AGAAGATCTA GAAGCTTTGG TTCAGCATGC TATCAAGTGG
TCTCCTGTGG CGAATACTTA TATGAATGCA GTGGATTTGT CTGGCAAATT AGTCAGCTAA
 
Protein sequence
MTEVYVPSCL RPIDTDGLNK LAEAGKAAPD TIKTLKSKTV LEGQFKNFNY VRDLDPVVVD 
EPPVLLGEDT APNPSEMALL SLGSCLSVGV QANASARGIN LNKLEIDLEG DINITAVWGT
GDVDPNKKLG VTEVRAFFTI EAPGSSQEDL EALVQHAIKW SPVANTYMNA VDLSGKLVS