Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0018 |
Symbol | |
ID | 3760383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 21893 |
End bp | 22711 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637784724 |
Product | peptidase M48, Ste24p |
Protein accession | YP_390289 |
Protein GI | 78484364 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.273769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTTA AATCCTTTTT GTTTCCCGTT GTCATATCCA TCAGTACGCT TGGACTGTTA AGTTGTAGCG GCGCCACCAC TAAAAAAGGA ACCGTTGGTG TCGAGCGCCA ACAGATGCTC TTAATTTCCG AAGCTGAAAT GCAGAAAGGG GCTGAACAAG CGTATGGTGA GATTTTAGCG GAAGCGAAAA AGAACAAAAC CCTCAACACC GACCCGGTGA TGGTCAAACG TATCAGAACG GTGGCTGATC GACTCATTCC TCAAACCAAA ATCTTTCGTG AAGACGCCCC CAGTTGGAAC TGGGAAGTGA ACTTAATTAA GTCTGATCAG CTGAATGCCT GGTGTATGCC CGGCGGTAAA ATTGCGTTTT ATACTGGCAT TATTGTTGAA CTCAAACTAA CGGATGCTGA AATTGCCGCC ATTATGGGGC ATGAAATTTC CCATGCCTTA AGAGAACATG GTCGTGAACG CGCCTCTCAA GCGTTGGTCA GCCAAGTAGG CTTAACGGCT TTGAGCATCC TCACCGGAAT GGAAGGCGCT GCAATGGATG CCAGTAGCAT GGTTGTGCAA ACCACGTTTT TACTGCCTAA CAGTCGAACC CATGAAACAG AATCTGATCG AATGGGCATT GAGCTTGCAG CACGAGCAGG CTATGACCCT TATGCGGCGG TCAGTGTCTG GCAAAAAATG GCTAAAATTT CAAAAGATGC GCCGCCTGAA TTCTTAAGCA CACACCCTTC CAACGAAACA CGAATTGATG ATTTAAAACG ATACGCTCAA AAAGTGGAAC CGCTGTACCA AAAAACTCAA CAACCTTAA
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Protein sequence | MSFKSFLFPV VISISTLGLL SCSGATTKKG TVGVERQQML LISEAEMQKG AEQAYGEILA EAKKNKTLNT DPVMVKRIRT VADRLIPQTK IFREDAPSWN WEVNLIKSDQ LNAWCMPGGK IAFYTGIIVE LKLTDAEIAA IMGHEISHAL REHGRERASQ ALVSQVGLTA LSILTGMEGA AMDASSMVVQ TTFLLPNSRT HETESDRMGI ELAARAGYDP YAAVSVWQKM AKISKDAPPE FLSTHPSNET RIDDLKRYAQ KVEPLYQKTQ QP
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