Gene Tcr_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0010 
Symbol 
ID3760375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp11988 
End bp12548 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content48% 
IMG OID637784716 
Producthypothetical protein 
Protein accessionYP_390281 
Protein GI78484356 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.019528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTT TATTCTTACC ACTTTTGTTA TCGCTCTTTG TCGTCTCTTC CAATGCGTTA 
GCCGATGAGT ATCGAGACAC GGTCAAAGTT TTTCAAGCTG CGGATGCGCC GAATGCTTTT 
TTTAAGTCGG CTTACGGCTA TGCGGTGTTC CCAACCATTG GAAAAGCTGG CTTTTTTATC 
GGTGGGGCTT ATGGTGAGGG CCGTGTTTAC AAACATAACA AATATACAGG CACCACCACT 
ATGACTCAGG CCTCGGTGGG TTTCCAGCTT GGTGGTCAGG CGTACAGTCA AATCATCTTC 
TTTGAAGATG CTCGCGCTTA TAATGAGTTT ACCAGTGGCA ATTTTGAATT CAGCGCACAA 
GCAAGTGCCA TTGCCATTAC AGCGGGTGCG TCGGCTGAAG CCGGCACAAA AGGCACGGGC 
ACTTCGGCCA GTGGGGGGCA AAATAACGCA GTGACTTCTG CAAAATACTA TCGTGGCATG 
GCCACCTTCG TCATCGCAAA AGGCGGATTA ATGTATGAAG CCACCATTGC CGGCCAGAAG 
TTTAGTTTCA CACCTAAATA A
 
Protein sequence
MRRLFLPLLL SLFVVSSNAL ADEYRDTVKV FQAADAPNAF FKSAYGYAVF PTIGKAGFFI 
GGAYGEGRVY KHNKYTGTTT MTQASVGFQL GGQAYSQIIF FEDARAYNEF TSGNFEFSAQ 
ASAIAITAGA SAEAGTKGTG TSASGGQNNA VTSAKYYRGM ATFVIAKGGL MYEATIAGQK 
FSFTPK