| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0006 |
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| Symbol | |
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| ID | 3760371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 6102 |
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| End bp | 7295 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637784712 |
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| Product | Outer membrane protein-like |
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| Protein accession | YP_390277 |
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| Protein GI | 78484352 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00129905 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA TACTGGTCTT TTTAAGCGCA TGGACTTTAA GCGCTAATGC TTGGGCGGTG
ACCTACAGTG ACTTACTTCC CAATGTCATT AATCAATTGC CACAAAAACA AGAACTGATC
GATTTCCAAG CCCTATCCAG CGCAAACCAA ACCGCCGCCG ACAGTTGGGT GGCAGGCGAT
ATCGCACTGA GTTTAAAACA TGAAAACGAT GCCTTAACCG GAAACCAAGG GTTCGAATCT
TGGGAAGGCG GTGCGCGTTT TCCGATTTGG TTACCAGGCC AATCCAGCAG TCGCCAACAA
ATCGGTAACG CTTACCAATC TTTAAACCAA GTTGGCCGAC AACACATCCA GCTTCTGGCT
TCCAAACAAC TTCGTCAGTT AGTCTGGCAA ACAAAAAAAG CCAAAGTCAG TCTTAAGTTT
GCTTATAAAG ATTTAAAACA AACTCAAACC TTAGTGGCGT TGGTGTCTCA AAAAGTTGAC
GCTGGAGAAA GCCCAAAATT TGATTTGCTA CTGGCTCAGA AATCCTTATT CAAAGCTCAA
AAAAATGTCG CTCAGAAAGA AGCGACTTAT CAAGTGGCTT TGCAAAACTA TACCCAATGG
ACCCAACAGA CCGATTTACC GTCTCCGTTA GCTGAAACGC TGGCGTCACA AACCCTGACA
CTGGAGCAGC ATCCGGATTA TCAAATGATG CAGGCACAGG TTCAAGCGGA ACAAGCCAAA
CTCGAACTGA CCAAAGCCAG TCAGCGTAGC AACCCGAGCG TGTATGTGGG CGCCAAGAAT
GAACGTGATA AGCAGACTTC AGACAATAGT ATTTTAATTG CCGAAGTCAG TTTCCCGATT
GGTGCTGACC CTACCGCACC GTCACGTATT GCGGAACAAC GCCAAGCGGT ATCACAACGC
CAAATTGCAC AAAACCAAGC CAAACAACAA TTACAACTGA ACTTGATTCG TGCCAAAGAA
GCTTGGGTGT CTGCTCAGAA AACCGAACAG CTCTCTCAGC AACAAAATAC CTTGTCTGAA
GAAGCCATGC AACTGGCCAA AATGGCGTAT CGACAAGGCG AAACGTCGAT TCAAAATTTA
CTGCTGATGA AACAACAATA TTTTGAAGAT AAATTAAATT TTAAATTAGC CCAATTGAAT
CGTTTAGAAG CGATTGCCAA TCTGAATCAA GCCCTAGGAG TGAGCCTAAA ATGA
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| Protein sequence | MKAILVFLSA WTLSANAWAV TYSDLLPNVI NQLPQKQELI DFQALSSANQ TAADSWVAGD
IALSLKHEND ALTGNQGFES WEGGARFPIW LPGQSSSRQQ IGNAYQSLNQ VGRQHIQLLA
SKQLRQLVWQ TKKAKVSLKF AYKDLKQTQT LVALVSQKVD AGESPKFDLL LAQKSLFKAQ
KNVAQKEATY QVALQNYTQW TQQTDLPSPL AETLASQTLT LEQHPDYQMM QAQVQAEQAK
LELTKASQRS NPSVYVGAKN ERDKQTSDNS ILIAEVSFPI GADPTAPSRI AEQRQAVSQR
QIAQNQAKQQ LQLNLIRAKE AWVSAQKTEQ LSQQQNTLSE EAMQLAKMAY RQGETSIQNL
LLMKQQYFED KLNFKLAQLN RLEAIANLNQ ALGVSLK
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