Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0004 |
Symbol | |
ID | 3762393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 3978 |
End bp | 4649 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637784710 |
Product | two component transcriptional regulator |
Protein accession | YP_390275 |
Protein GI | 78484350 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000117037 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA TATTACTCGT TGAAGATGAA GCCTTATTGG TCGAGAATCT TAAAAAAAAT TTAAGTCAGC AACAGTACAT CGTCGACAGT GCTTTGGATG GTGAGGAAGC CCTGTATTTA CTGAACGAGT TTGAATACGA TCTCATTATT TTAGATTTAG GCCTTCCCAA AAAATCCGGA TTACAGGTTC TGGAGCAGAT TCGAGCAGAC CAAAACACAA CGCCGGTACT CATTTTAACG GCTCGCAACA CCTGGCAAGA GCGAGTGGAA GGGTTAAAAA AAGGCGCCGA CGATTATCTC GGCAAGCCGT TTCACTTCGA AGAGTTGCTC GCCCGAATAG AAGTGCTGTT AAAACGCCCC ACGCAACCGC AAGCACGACG CTTACAATTT CAAGAGTATG AATTAGACTT GGACTGCCGC GAACTGAAGG TCAAAGAGCA ACGTTTTGCG TTAACCAAAA CTGAATTTGC ATTAGCCAGA CTGTTTTTAT CCCACCCTAA CCGAGTATTC TCAAAAGACA CCTTAATGCA GCGATTAGGC GACCAGCACC ATGAACGAGA CAGCAACCTG ATTGAGGTCT ATATTCGAAA ACTGCGCCAA TATATGGGGA AAACGGCCAT TGAAACCTTA CGTGGCCAAG GGTATCGTTT TGTGGGAGAG ACTTCTTCAT GA
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Protein sequence | MSKILLVEDE ALLVENLKKN LSQQQYIVDS ALDGEEALYL LNEFEYDLII LDLGLPKKSG LQVLEQIRAD QNTTPVLILT ARNTWQERVE GLKKGADDYL GKPFHFEELL ARIEVLLKRP TQPQARRLQF QEYELDLDCR ELKVKEQRFA LTKTEFALAR LFLSHPNRVF SKDTLMQRLG DQHHERDSNL IEVYIRKLRQ YMGKTAIETL RGQGYRFVGE TSS
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