Gene Tcr_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0004 
Symbol 
ID3762393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp3978 
End bp4649 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content45% 
IMG OID637784710 
Producttwo component transcriptional regulator 
Protein accessionYP_390275 
Protein GI78484350 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000117037 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA TATTACTCGT TGAAGATGAA GCCTTATTGG TCGAGAATCT TAAAAAAAAT 
TTAAGTCAGC AACAGTACAT CGTCGACAGT GCTTTGGATG GTGAGGAAGC CCTGTATTTA
CTGAACGAGT TTGAATACGA TCTCATTATT TTAGATTTAG GCCTTCCCAA AAAATCCGGA
TTACAGGTTC TGGAGCAGAT TCGAGCAGAC CAAAACACAA CGCCGGTACT CATTTTAACG
GCTCGCAACA CCTGGCAAGA GCGAGTGGAA GGGTTAAAAA AAGGCGCCGA CGATTATCTC
GGCAAGCCGT TTCACTTCGA AGAGTTGCTC GCCCGAATAG AAGTGCTGTT AAAACGCCCC
ACGCAACCGC AAGCACGACG CTTACAATTT CAAGAGTATG AATTAGACTT GGACTGCCGC
GAACTGAAGG TCAAAGAGCA ACGTTTTGCG TTAACCAAAA CTGAATTTGC ATTAGCCAGA
CTGTTTTTAT CCCACCCTAA CCGAGTATTC TCAAAAGACA CCTTAATGCA GCGATTAGGC
GACCAGCACC ATGAACGAGA CAGCAACCTG ATTGAGGTCT ATATTCGAAA ACTGCGCCAA
TATATGGGGA AAACGGCCAT TGAAACCTTA CGTGGCCAAG GGTATCGTTT TGTGGGAGAG
ACTTCTTCAT GA
 
Protein sequence
MSKILLVEDE ALLVENLKKN LSQQQYIVDS ALDGEEALYL LNEFEYDLII LDLGLPKKSG 
LQVLEQIRAD QNTTPVLILT ARNTWQERVE GLKKGADDYL GKPFHFEELL ARIEVLLKRP
TQPQARRLQF QEYELDLDCR ELKVKEQRFA LTKTEFALAR LFLSHPNRVF SKDTLMQRLG
DQHHERDSNL IEVYIRKLRQ YMGKTAIETL RGQGYRFVGE TSS