Gene Tcr_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0001 
Symbol 
ID3762390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp
End bp1404 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content44% 
IMG OID637784707 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_390272 
Protein GI78484347 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000009849 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAACAA CGCTTTGGCC ACAAGTCCTT AAACAATTAG AAGCTGTTTT GAACGACCAG 
CAATTTTTAA CCTGGATTCG TCCATTAGAA GCTGTAGAAG AAGATAACAC TCTGCGTCTT
ATCGCACCGT CCGGGTTTAT CTTAGACTGG GTGAACAAAA AACTGCTTTC TCAAATCAAA
CAAGCCGTGT ATTTGGTGGC TCCGGTCAAC ACGCCAGAAG TGACTTTGGA AGTGGGTGAA
TACGCCATTG AAAGTTTCAA TGAACCTGAA AACACATCGG TACCGCAGCC ATTAAGAGAA
ACCAAGGCCG AAAGAGAAGC CGCCGAAAAA GCCGCTTCAA GTACTTCTAA GAAAAAATCC
GACAGTCCTC CTAAAAAAAC CATTAAACAC AATCTAAACA CCAATTTCAC TTTTGACACC
TTTGTCGAAG GGAAGGCCAA CCAGCTTGCG GCGGCCGCGG CACGGCAGGT TGCAGATAAC
CCTGGTGGAA GCTATAACCC TTTCTTTATT TATGGCGGCG TCGGGCTGGG TAAAACGCAT
TTAATGCACG CCATCGGGAA TGAATTGATG CGTCGAGACC CAAACGCTCG TGTGGTGTAT
CTTCATTCAG AACGATTTGT GGCCGACATG GTCAATGCGC TCCGTCATAA CAAAATTGAT
GAATTCAAAC GCTTCTATCG CTCGTTGGAC GCGTTGTTAA TCGATGATAT TCAGTTCTTT
GCCAAAAAAG AACAATCGCA AGAAGAGTTC TTCCATACCT TCAACACGTT ATTGGAAGGA
AACAAGCAGG TTATTTTAAC CAGTGACCGT TTCCCTAAGG AAGTGGATGG ATTGGAAGAT
CGATTGAAAT CACGTTTTGG CTGGGGATTA ACCATTGCGG TTGAACCACC TGAATTTGAA
ATGCGGGTGG CCATCTTAAT GAAAAAGGCG GCTGAGTTTG GGTTTCTATT GCCGGATGAA
GTCGCGTTTT TCATTGCCAA ACGCTTACGC GGTAATGTGC GTGACTTAGA AGGGGCCTTA
AAACGGGTTG GCGCGTTTGC ACAATTTACT CAACAACTGG TCACCGTTGA CTTGGCAAAA
GATGCTTTAA AAGACTTACT GGCACTGCAA CAAAAAATGG TCACCTTGGA AAACATCCAA
AAAACCGTGG CCGATTATTA CAAAATTCGA GTGGCCGACC TGCTTTCTAA AAGAAGAACG
CGTAATATTG CTCGCCCAAG ACAGATGTCG ATGGCCATTT CTAAAGAGTT GACCAGTCAT
AGCTTGCCTG AAATTGGCGA TGCCTTTGGA GGGCGAGATC ACACGACGGT ATTGCATGCG
GTTCGTAAAA TAAACGAACT CAAAGAAACC GATCATCGTA TTGAAGAAGA CTTCAATAGC
TTGATTCGAA TTATTACGAA TTAA
 
Protein sequence
MTTTLWPQVL KQLEAVLNDQ QFLTWIRPLE AVEEDNTLRL IAPSGFILDW VNKKLLSQIK 
QAVYLVAPVN TPEVTLEVGE YAIESFNEPE NTSVPQPLRE TKAEREAAEK AASSTSKKKS
DSPPKKTIKH NLNTNFTFDT FVEGKANQLA AAAARQVADN PGGSYNPFFI YGGVGLGKTH
LMHAIGNELM RRDPNARVVY LHSERFVADM VNALRHNKID EFKRFYRSLD ALLIDDIQFF
AKKEQSQEEF FHTFNTLLEG NKQVILTSDR FPKEVDGLED RLKSRFGWGL TIAVEPPEFE
MRVAILMKKA AEFGFLLPDE VAFFIAKRLR GNVRDLEGAL KRVGAFAQFT QQLVTVDLAK
DALKDLLALQ QKMVTLENIQ KTVADYYKIR VADLLSKRRT RNIARPRQMS MAISKELTSH
SLPEIGDAFG GRDHTTVLHA VRKINELKET DHRIEEDFNS LIRIITN