Gene Dde_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3777 
Symbol 
ID3758765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp3720145 
End bp3721221 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID637784699 
Productnicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_390264 
Protein GI78358815 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACATT CCGTGGAATA CATAATACAG CACATTCCCC CTGTTGATAC TTCGCTTGCC 
GGTGCTGCAC AGGCGCATCT GGACAACCTG ACAAAGCCGC GGGGCAGTCT GGGACGTCTG 
GAAGAACTGG CGCTCCGCCT TTACTGCATA CAAGGCGGCG ATACCCCGCT GGCAGCCGAT 
CCGGCGCGCA TTTACACCAT TGCCGGTGAT CATGGTGTAG CAGCCGAAGG CGTCAGCCCC 
TTTCCGCAGG AGGTCACGCG GCAGATGGTG CTCAACTTTC TGAGCAACGG CGCAGGCATC 
AATGTACTGT GCAATACCGT GGGCTGTGAA CAGTTTGTTG TGGATGCCGG CAGCTGCGGA 
GGGGCCTACC CCGAACACCC CCGGCTGATA CAGCGCAAAA TTCATCCCGG AACAGCCAGT 
ATCGCGCAGG GTCCGGCCAT GACAGCCGAG CAATGCAGAC AGGCCCTGCA ACTGGGCATT 
GATCTGGCCG GCATGGCCCG CGAGGCGGGT TGCCGCACCG TGGGTACAGG CGAGATGGGC 
ATATCAAATA CCACTCCTTC CACAGCGCTT TACTGTGCCT ACCTCGGGCT TGACCCTGCC 
GGCATCACCG GCCCCGGAGC GGGCATCACC CCGGACCTTG TAAAACATAA GACAGATATT 
ATCCGCAGAG CCCTTGCCGT CAACGCCGGT GCGGTACAGT CACAAAACGC CGTGGATATT 
CTTGCCGCCC TAGGGGGCTA CGAAATAGCG GCTCTGACGG GACTTATTCT CGGTGCCGCC 
TACCATCGCA TGGCTGTTCT GGTGGACGGA TTCATTTCCA CTGCCGCATG GACCGCCGCA 
TGGAAGATAT GCCCCGCTGT GAGCGATTAC AGCTTTTTCA GCCACGCATC TGCCGAAGCA 
GGCCACAAAA CGGCGCTGCG TTCCATGGGT ATTGAGCCTC TGCACGATCT CGGTCTGCGC 
CTGGGAGAAG GCACCGGAGC TGCTCTCACC CTGTTCCTGC TGCGCTCCGC GGCGGCAATT 
TTCAACGATA TGGCAACGTT TTCCTCGGCA GGAGTCGCCA CACAATCATC CTGTTGA
 
Protein sequence
MSHSVEYIIQ HIPPVDTSLA GAAQAHLDNL TKPRGSLGRL EELALRLYCI QGGDTPLAAD 
PARIYTIAGD HGVAAEGVSP FPQEVTRQMV LNFLSNGAGI NVLCNTVGCE QFVVDAGSCG 
GAYPEHPRLI QRKIHPGTAS IAQGPAMTAE QCRQALQLGI DLAGMAREAG CRTVGTGEMG 
ISNTTPSTAL YCAYLGLDPA GITGPGAGIT PDLVKHKTDI IRRALAVNAG AVQSQNAVDI 
LAALGGYEIA ALTGLILGAA YHRMAVLVDG FISTAAWTAA WKICPAVSDY SFFSHASAEA 
GHKTALRSMG IEPLHDLGLR LGEGTGAALT LFLLRSAAAI FNDMATFSSA GVATQSSC