Gene Dde_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3772 
Symbol 
ID3758760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3716205 
End bp3716831 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content54% 
IMG OID637784694 
ProductTPR repeat-containing protein 
Protein accessionYP_390259 
Protein GI78358810 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA GCTACGATAA CATCGACGAG TACATCGCCG ATTTGCAGGC TGCAATCAAG 
GACAATGCCG ACTGCGCAAA CCACCACTAC AATCTCGGCG TTGCCCTGCT TTCCAAGCGC 
GACTGGGCCG CAGCGGAGCA GTCGTTCCGC GAGTGCGTGC GTAACTCGCC GCGCTTTGCC 
GAAGCCTTTG TGCAGCTTGG CGGCATATGC CTGCAGCGTG GCGATCTGGA CGGATGTATG 
CGCTACAACG AAGAAGCTGC CCAGTGCAGG GCTAAGTTCC CTGTACCGTG GGCTAACATA 
GCTTTTGTCC ACCTGCAGCG CGGTGAACCC GAACCGGCAA TCGCGGCCCT GAAAAAAGCC 
CTGAAGTGGG ATCCTGACTT TGTACAGGCA AAGGCGACTC TGGCCACAGC CTACTTTATG 
ATGGAAGACT ACGACATGGT ACTGGATGTG TGTAAGCAGA TCATCCAGAA AGAGCCTTCG 
TTTGCTCCTG CATATAACAA CATGGCTCTC GCATACTTTG AAAAAGGTGA GTTTGCCAAA 
GCTGTGCAGT ATGCCGATGA AGCACAGAAG CTCGGCTTTG AAGTGGCTCC CCAGTTTCTT 
GAAGAACTGA AGCCCCACCG CAGCTAG
 
Protein sequence
MKDSYDNIDE YIADLQAAIK DNADCANHHY NLGVALLSKR DWAAAEQSFR ECVRNSPRFA 
EAFVQLGGIC LQRGDLDGCM RYNEEAAQCR AKFPVPWANI AFVHLQRGEP EPAIAALKKA 
LKWDPDFVQA KATLATAYFM MEDYDMVLDV CKQIIQKEPS FAPAYNNMAL AYFEKGEFAK 
AVQYADEAQK LGFEVAPQFL EELKPHRS