Gene Dde_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3638 
Symbol 
ID3758625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3602102 
End bp3602647 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID637784560 
Producttartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit 
Protein accessionYP_390126 
Protein GI78358677 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACCT GGCATCTTAC CACACCACTC AGGTCTGAGG ATGTGCTGCA ACTGCGCGCC 
GGTGATGTCG TGCTGCTTTC GGGCGATATA TATACAGCCC GCGATGCGGC GCACAAACGC 
ATCATGGAAC AGCTGGACAG CGGCGGCACC CCGCCTTTTC CGCCGGAAGG AGCGGTCGTG 
TACTATGTGG GACCGGCACC CGCGCCGCCG GGACGCCCCA TCGGGTCGGC TGGGCCCACC 
ACAAGCGGCC GGATGGACAG CTACACTCCC CGCATGCTTG CACTGGGGGT GCGTGCCACC 
ATAGGCAAGG GAAAGCGCTG CGACGCGGTG CGCAACGCCA TGTGTGAGCA TGGTGCTGTG 
TATCTGGGAG CCACGGGCGG CGCCGGTGCG CTGCTGTCAC AGTGTGTTCT GGCCGCCGAG 
GTTGTGGCCT ATGAAGAGCT GGGCCCGGAA GCCGTGCGCA GGCTGAAGGT GCGTGATTTT 
CCGCTGCTGG TGATCAACGA TGCCTGCGGC GGCGAGCTGT ATGTAACCCC CAAACTTGAT 
CTGTGA
 
Protein sequence
MATWHLTTPL RSEDVLQLRA GDVVLLSGDI YTARDAAHKR IMEQLDSGGT PPFPPEGAVV 
YYVGPAPAPP GRPIGSAGPT TSGRMDSYTP RMLALGVRAT IGKGKRCDAV RNAMCEHGAV 
YLGATGGAGA LLSQCVLAAE VVAYEELGPE AVRRLKVRDF PLLVINDACG GELYVTPKLD 
L