Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3627 |
Symbol | |
ID | 3758614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3590745 |
End bp | 3592130 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637784549 |
Product | outer membrane efflux protein |
Protein accession | YP_390115 |
Protein GI | 78358666 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.433273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGGA TGCCGGGAGG CCGTATGCAT GTTGTGAAGC AAAAATTCCT GCTGCCGCTG ACGCTGGCCG CAGTGCTGGT GTGGAGCTCG GCCGCAGCTG CCGCCAACGC CACCATGCCG GATGCCGGCA CCGCGGGCGG GTATAATCTG GAGCAGGCGG TGCTCAAGGC CCTGCAGGAT AACCCCAGCA TCCGTGCCGC CAAGGCAGGC GACCTTGCTG CCGAAGAGTC GCGCAAGGCT GCCCGCGGCG GGTTCGGTCC TTCGCTGACC GGCAGCTACG GATATCTGAA AAGCGACCAC GACAAACCCC GCCGTGATTT CGTGCAGTAC GAGGACAACC TGTATACGCT CGGGGTCAAT CTTACCCAGC CGCTGTTCAC GGGATTCAAT GTACTGTCCA CGTACCAGAA GGCGGCTCTT GAAAAAGAGC AGGCTGCCGC ACAGGTGGAC AACGCGGAAC TGCAGCTCAT TTTGCTGGTG CAGGAAAATT TTCTGCAGCT GCTCGCCGCG CGTGAAAACC AGCGCAGCGC CGCAGACCAG CTGGAACGCC TGCAAAGTCA GCTCAAGGTC ACGCAGGCAT TTTATGATGT GGGGCTGAAC CCCCGCATTG ACGTGCTGCA GGCCGAGCGC GATGTTTCCG ATGCCGAAGA CAAGCTGTTG CAGGCGGAAA ACAGTGTGCA GACACAGATT GCCCGTCTGA ACACGCTGCT CAATCTGCCT CTGGACGCAA GTGCCTCCTA TCTTGGCCGG CTGGATTTTG TGCCGTTTTC GCTGACGCTG GAAGAGTGCC TTGAAAGGGC ATACCGGCGC CGCCCCGATA TTTTCATTGC CCAGAAAGCC ATTGAAGTGG CCCGCAAAGA CAGAACCATC GCCCAGAGCG GATTTTATCC GCAGATTGGC GCGGAGGCCG ATTATTCGAG AAAGGGTGAC AACCCCGTGG TGGACGGCAG CAGCGCCATG TCCACGGAGT TCAGTGAATG GTCGGTGGGT GTTTCCGCCA AGTGGAATCT GTTCGATTCC GGCAAGGATT ATTATGCACA GAGTGCTGCC GCGCAGGTGG TGAACAGGGT GATGGCGGAC GAAGCGAATC TGCGGCAGGA AGTGGCCTTT GAGGTCAAGT CCCGTCATCT TAAACTGTCC GAAGCCGCCA AACGTATCAA GGTGGCCCAG AAAACCGTTG ATCAGGCCGC GGAAGCCTAT CGCATGGCGG TGGCACGCTA TCAGGCTCAG GTGGGTACAA ACACCGACGT GCTGGATGCG CAGGCCTCGC TGACCAGTGC CGAAGCCGCG CTGACCAGCG CGCAGGCCGA ATATCTTGTG GCCCTTGCCA GCCTGTATGT GTCCATTGGT GACAAAAATC CTTCGCTGCA TATGACAGCG CCCTAG
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Protein sequence | MLRMPGGRMH VVKQKFLLPL TLAAVLVWSS AAAAANATMP DAGTAGGYNL EQAVLKALQD NPSIRAAKAG DLAAEESRKA ARGGFGPSLT GSYGYLKSDH DKPRRDFVQY EDNLYTLGVN LTQPLFTGFN VLSTYQKAAL EKEQAAAQVD NAELQLILLV QENFLQLLAA RENQRSAADQ LERLQSQLKV TQAFYDVGLN PRIDVLQAER DVSDAEDKLL QAENSVQTQI ARLNTLLNLP LDASASYLGR LDFVPFSLTL EECLERAYRR RPDIFIAQKA IEVARKDRTI AQSGFYPQIG AEADYSRKGD NPVVDGSSAM STEFSEWSVG VSAKWNLFDS GKDYYAQSAA AQVVNRVMAD EANLRQEVAF EVKSRHLKLS EAAKRIKVAQ KTVDQAAEAY RMAVARYQAQ VGTNTDVLDA QASLTSAEAA LTSAQAEYLV ALASLYVSIG DKNPSLHMTA P
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