Gene Dde_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3627 
Symbol 
ID3758614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3590745 
End bp3592130 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content59% 
IMG OID637784549 
Productouter membrane efflux protein 
Protein accessionYP_390115 
Protein GI78358666 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.433273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGGA TGCCGGGAGG CCGTATGCAT GTTGTGAAGC AAAAATTCCT GCTGCCGCTG 
ACGCTGGCCG CAGTGCTGGT GTGGAGCTCG GCCGCAGCTG CCGCCAACGC CACCATGCCG
GATGCCGGCA CCGCGGGCGG GTATAATCTG GAGCAGGCGG TGCTCAAGGC CCTGCAGGAT
AACCCCAGCA TCCGTGCCGC CAAGGCAGGC GACCTTGCTG CCGAAGAGTC GCGCAAGGCT
GCCCGCGGCG GGTTCGGTCC TTCGCTGACC GGCAGCTACG GATATCTGAA AAGCGACCAC
GACAAACCCC GCCGTGATTT CGTGCAGTAC GAGGACAACC TGTATACGCT CGGGGTCAAT
CTTACCCAGC CGCTGTTCAC GGGATTCAAT GTACTGTCCA CGTACCAGAA GGCGGCTCTT
GAAAAAGAGC AGGCTGCCGC ACAGGTGGAC AACGCGGAAC TGCAGCTCAT TTTGCTGGTG
CAGGAAAATT TTCTGCAGCT GCTCGCCGCG CGTGAAAACC AGCGCAGCGC CGCAGACCAG
CTGGAACGCC TGCAAAGTCA GCTCAAGGTC ACGCAGGCAT TTTATGATGT GGGGCTGAAC
CCCCGCATTG ACGTGCTGCA GGCCGAGCGC GATGTTTCCG ATGCCGAAGA CAAGCTGTTG
CAGGCGGAAA ACAGTGTGCA GACACAGATT GCCCGTCTGA ACACGCTGCT CAATCTGCCT
CTGGACGCAA GTGCCTCCTA TCTTGGCCGG CTGGATTTTG TGCCGTTTTC GCTGACGCTG
GAAGAGTGCC TTGAAAGGGC ATACCGGCGC CGCCCCGATA TTTTCATTGC CCAGAAAGCC
ATTGAAGTGG CCCGCAAAGA CAGAACCATC GCCCAGAGCG GATTTTATCC GCAGATTGGC
GCGGAGGCCG ATTATTCGAG AAAGGGTGAC AACCCCGTGG TGGACGGCAG CAGCGCCATG
TCCACGGAGT TCAGTGAATG GTCGGTGGGT GTTTCCGCCA AGTGGAATCT GTTCGATTCC
GGCAAGGATT ATTATGCACA GAGTGCTGCC GCGCAGGTGG TGAACAGGGT GATGGCGGAC
GAAGCGAATC TGCGGCAGGA AGTGGCCTTT GAGGTCAAGT CCCGTCATCT TAAACTGTCC
GAAGCCGCCA AACGTATCAA GGTGGCCCAG AAAACCGTTG ATCAGGCCGC GGAAGCCTAT
CGCATGGCGG TGGCACGCTA TCAGGCTCAG GTGGGTACAA ACACCGACGT GCTGGATGCG
CAGGCCTCGC TGACCAGTGC CGAAGCCGCG CTGACCAGCG CGCAGGCCGA ATATCTTGTG
GCCCTTGCCA GCCTGTATGT GTCCATTGGT GACAAAAATC CTTCGCTGCA TATGACAGCG
CCCTAG
 
Protein sequence
MLRMPGGRMH VVKQKFLLPL TLAAVLVWSS AAAAANATMP DAGTAGGYNL EQAVLKALQD 
NPSIRAAKAG DLAAEESRKA ARGGFGPSLT GSYGYLKSDH DKPRRDFVQY EDNLYTLGVN
LTQPLFTGFN VLSTYQKAAL EKEQAAAQVD NAELQLILLV QENFLQLLAA RENQRSAADQ
LERLQSQLKV TQAFYDVGLN PRIDVLQAER DVSDAEDKLL QAENSVQTQI ARLNTLLNLP
LDASASYLGR LDFVPFSLTL EECLERAYRR RPDIFIAQKA IEVARKDRTI AQSGFYPQIG
AEADYSRKGD NPVVDGSSAM STEFSEWSVG VSAKWNLFDS GKDYYAQSAA AQVVNRVMAD
EANLRQEVAF EVKSRHLKLS EAAKRIKVAQ KTVDQAAEAY RMAVARYQAQ VGTNTDVLDA
QASLTSAEAA LTSAQAEYLV ALASLYVSIG DKNPSLHMTA P