| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3603 |
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| Symbol | |
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| ID | 3758589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 3560212 |
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| End bp | 3563172 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637784524 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_390091 |
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| Protein GI | 78358642 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0836836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGC ACCTCACCAC AGATACCGTG GCGGAATACA TAGCCGCCCT CAAGGCTTCG
GACAGGCCGG GCAGTTTTGT GACATGCCAC CGGATTCTGC CGGAGATTCC CGCGCGCACG
GCGCCCGCGA CGCGCCCGTG GCCCCGCGCG GTGCAGGAGG TGATGCTCCA TGCAGGTGTC
GGCAGCCTGT ACACCCATCA GGCCCTTGCC ACCGACCATA TCCGCGCCGG CCGGCATGTG
GTGGTGGCCA CCCCCACGGC CAGCGGCAAG ACACTTATCT ATAACCTGCC GGTCATAGAA
CAGTTTCTGC ACAACCCGGA AACAAGGGCG CTCTATCTTT TTCCGCTCAA GGCGCTGGCG
CAGGACCAGC TGGCAACCCT GAACGCCCTG ACGGCACACT GGGCGGCTGA TGCCCGCCCT
GCGGCAGCCA TCTACGACGG CGACACCACG GCATGGTTCC GCAAAAAAAT CCGCCGCCAG
CCGCCCAACG TCCTGCTGAC AAACCCCGAA ATGCTGCACC TGTCCATCCT GCCGCACCAC
GAACAATGGA CACGTTTTCT GGCCGGACTT TCGTTTGTGG TGGTGGATGA AGCCCACACC
TACAGGGGAG TGCTCGGTTC GCATATGGCG CAGCTGTTCC GCAGACTGGA ACGCATCTGC
ACCCGTTACG GCGCTGCTCC TTCGTTTGTG TTTTCTTCCG CCACGGTGGG CAATCCGGCA
GAACTGGCCG CAAATCTTAC CGGCATACGC CCTGTGCCCG TGCTGGAAAG CGGAGCACCG
CAGGGGCGGC GTCATGTTGT CTTCATCGAC CCGCCCGAAA GCCCGGCATC TACTGCCATC
CTGTTGCTGA AGGCAGCTCT GGCGCGCGGT CTGCGCACCA TTGTGTACTG CCAGTCGCGC
CGCATGACAG AACTAATCAG CCTGTGGGCG GGCAGCAAAG CGGGAGGGTA CGCCGACAGA
ATAAGCGCCT ACCGTGCCGG ATTTCTGCCC GAAGAGCGCC GCGACATAGA AGCCCGCATG
CACAGCGGGC AGTTACTGGC CGTCATAACC ACCAGCGCGC TGGAGCTGGG CATAGACATC
GGTTCGCTGG ACCTGTGCAT TCTGGTAGGC TATCCGGGAA CTGTAATGTC CACACTGCAA
CGCGGCGGCA GAGTGGGACG GGCACAGCAG GAGTCCGCCG TGGTGCTGGT TGCCGGTGAA
GATGCGCTGG ATCAGTACTT CATGCGGCAC CCCGACGATT TTTTTGAACG CCCGCCGGAA
AATGCAGTGC TCAACCCGCA CAATCCGGTC ATTCTGGAAC GGCATCTGGA ATGTGCGGCG
GCTGAATTTC CGCTGGATGT GCATGAACCG TGGCTGACCG ACACCGCTGT GCGGCAGGCG
GCGGCAGAGC TGGAAAATAC CGGCCTGCTG CTGCGCAATG AAGACGGCAC CCGCCTGCTG
GCGGCACGCA AGCGCCCCCA GCGCCATGTG GAACTGCGCG GTGCAGGCCC CTCGTTTCAT
ATTCAGGACA TGGAAACAGG AGCGGTCATC GGCAGTGTGG ACGGACACAG AGCCTTCCGC
GAAACCCACC CCGGGGCGGT ATACCTGCAC CGCGGGCGGT CTTTTGTCAT AACCGGTCTG
GACACCGCGG CACGCACCAT CACCGCCGTA GCCGCCAATG TGGAATACTA CACGCGGGTA
CGCGGTAACA AATCCACTGA AATTCTGCAG GTGCTGGACA CAAAAACAGC ATGGAACACC
CGGGTGTGCC TTGCCCGCCT GCGCGTGACA GACCAGATAA CCGGTTACGA AAAAAGACAC
GCGCGCAGCG GTCAGATGCT GGGCATAACC CCGCTGGATC TGCCGCCCAA CATTTTCGAG
ACGGAAGGCC TGTGGTTTGA GGTGCAGGAT GCTGCACGCC GCGAGGTGGA AGACGCTTTC
ATGCATTTCA TGGGGTCCAT CCACGCGCTG GAACATGCCG CCATCGGCAT TCTGCCCTTG
CTGGTCATGA CAGACAGAAA CGATCTGGGC GGCATTTCAA CACCCATGCA TCCGCAGGTG
GGCAGGCCGT GCGTATTCAT ATACGACGGT ATGCCCGGCG GTGCGGGGCT GAGCCGTTCG
GCGTATGAAA AAGCCGGAGA ACTTTTTGCC AGCACGCGTG AGGTCATAGC CGGATGCCCC
TGCGAAACCG GATGTCCTTC GTGCGTGCAG TCGCCCAAGT GCGGTTCCGG CAACCGCCCC
ATAGACAAAG ACGGAGCGCT TTTTCTGCTG GACGCCATGC GCCGCTGCGC ACCGCCCCCG
CATGAAGCAA CCGGCATCGT GCCCGTGCAG CCGCACAGCC GGCACGCCGA AACACAGCAA
CAGGCCACGA CCGCCAAGGC ACAGCCCGTA CCGGAGCCCC GTATGAACAA CCGCTTTTCC
ATCCTCACCC CGCAATCCTA CGCCGTGCTC GACGTGGAAA CCCGCCGTTC GGCGCAGGAA
GCCGGAGGCT GGCACAAAGC CCACGCCATG GGCGTAAGCG TTGCAGTGCT GTACGATTCG
CGTACCGACG CCTTCACCGC CTACACGCAG GACAACGTGC CGGAGATGCT CCTGCGCCTT
GCGGAGTTCG ACCTTGTCAT CGGCTTCAAC ATCATCAGAT TTGATTACAA GGTGCTGGCC
CCGCTGTTGC CGCCGGACAC CCCGTGGCGA CTAGACGCAC TGCCGACGCT GGACATGCTG
GATGAAGTAA AAAAATGCCT CAGTTACCGG ATATCACTCG ACAATCTGGC CAGTGCCACA
CTGGATGCGC CCAAATCTGC CGACGGGCTG CAGGCGCTGG CATGGTGGAA ACAGGGCCGC
ATTGATGAAA TAGCTGCCTA TTGTGAACAG GATGTACGCA TCACGCGTGA CCTGTATCTC
TTCGGCCGCC GGAACGGATA TCTGCTGTTT ACCAACAAGG CAGGACAGAA AGTGCGCGTT
CCGGCCAGCT GGCAGGCCTG A
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| Protein sequence | MTQHLTTDTV AEYIAALKAS DRPGSFVTCH RILPEIPART APATRPWPRA VQEVMLHAGV
GSLYTHQALA TDHIRAGRHV VVATPTASGK TLIYNLPVIE QFLHNPETRA LYLFPLKALA
QDQLATLNAL TAHWAADARP AAAIYDGDTT AWFRKKIRRQ PPNVLLTNPE MLHLSILPHH
EQWTRFLAGL SFVVVDEAHT YRGVLGSHMA QLFRRLERIC TRYGAAPSFV FSSATVGNPA
ELAANLTGIR PVPVLESGAP QGRRHVVFID PPESPASTAI LLLKAALARG LRTIVYCQSR
RMTELISLWA GSKAGGYADR ISAYRAGFLP EERRDIEARM HSGQLLAVIT TSALELGIDI
GSLDLCILVG YPGTVMSTLQ RGGRVGRAQQ ESAVVLVAGE DALDQYFMRH PDDFFERPPE
NAVLNPHNPV ILERHLECAA AEFPLDVHEP WLTDTAVRQA AAELENTGLL LRNEDGTRLL
AARKRPQRHV ELRGAGPSFH IQDMETGAVI GSVDGHRAFR ETHPGAVYLH RGRSFVITGL
DTAARTITAV AANVEYYTRV RGNKSTEILQ VLDTKTAWNT RVCLARLRVT DQITGYEKRH
ARSGQMLGIT PLDLPPNIFE TEGLWFEVQD AARREVEDAF MHFMGSIHAL EHAAIGILPL
LVMTDRNDLG GISTPMHPQV GRPCVFIYDG MPGGAGLSRS AYEKAGELFA STREVIAGCP
CETGCPSCVQ SPKCGSGNRP IDKDGALFLL DAMRRCAPPP HEATGIVPVQ PHSRHAETQQ
QATTAKAQPV PEPRMNNRFS ILTPQSYAVL DVETRRSAQE AGGWHKAHAM GVSVAVLYDS
RTDAFTAYTQ DNVPEMLLRL AEFDLVIGFN IIRFDYKVLA PLLPPDTPWR LDALPTLDML
DEVKKCLSYR ISLDNLASAT LDAPKSADGL QALAWWKQGR IDEIAAYCEQ DVRITRDLYL
FGRRNGYLLF TNKAGQKVRV PASWQA
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