| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3572 |
|---|
| Symbol | |
|---|
| ID | 3758552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 3529380 |
|---|
| End bp | 3530900 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637784487 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase family protein |
|---|
| Protein accession | YP_390060 |
|---|
| Protein GI | 78358611 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3379] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAC CTGTCGAGCA TACCGTAAAA CGAGGCAGGT TTCCACGGCT GTGCCCGGTT
CCGCTTCCGG CCCTTCCTTG GTGGTGGCCG ATGCTGGCTT GCCGGCGCAT GTTCTGGTAC
ACCTTCGCCA TGTCGCAGAA AACGCAAACA GACCTGCACA AGGTTTCTCA CCGGCGGCGC
ATGGTTATTC TGGGACTGGA CGGACTGTCT TTGTCCATGG CTGTCAAACT GTGCGCCACC
GGCCGCTTTC CGCACCTTTC GCGCCTTGCG CTTGCACCGG AGTGCGGCAC AGTGCGGGCC
GAGCTGCCGG AACTGTCTCC TGTCAACTGG ACGTCTTTTT ATACCGGCTG CGGGCCGGAA
GATCACGGAA TTTTCGGATT CACCCGCATC AGTCCAGCCA GCTATCAGAT GGCACTTGCG
GATTTTTCTC AGGTGGCTGT TCCCACAATT TTTGACCGGT TGGGTGATGC CGGTTATGCA
AGCAGACTGG TGAACCTGCC CAACACGTAT CCGGTGCGTC CGGTCAAAGG TGCCATGACG
GTGGCTGGAT TTGTGGCACC GGAACTATCC CGTGCCGTGC ATCCGCCTTT TCTTGCGCAC
CGGCTGCGCG AGGCCGGATA CCTGCTGGAG GCGGATACCA CCCGCGGTGC TGCTGACCTG
CCGTATCTGC TTGCGCAGCT GCGTGCCACA CTGCAGTCGC GCAGATACGC TCTGGAGCTT
TTGTGGCCGG ACCTCGGCTG GGATGTGTTC ACCATAGTGC TCACAGAAAC AGACCGCCTT
TTTCATTTCT TTTACGATGC GGTGACTGAG CCTGACCACC CGCAGCATGA AGCCTGCATG
GTTTTGCTGC AGGAGTGGGA CGCACTGATC GGCCGCGTGC TGGAACTGTA CGACGCCCTG
CCTGTTCCGG GGCGCCTGAT GGCGCTGGCA GATCACGGGT TCACACGTCT GATCACAGAG
GTGGACATTA ACGCATGGCT GCGGCAAAAC GGGTACCTGT ATACACAGCA TCATGACGGT
GCGACGGCAG AGCTGGACGC CACGGGTATT CTGCCGGAGA CCAGAGCGTT TGCGCTGGAC
CCGGGCCGTA TCTATCTGCA TACGGCACAG CGGTTCGGCA GGGGCAGGCT GACCCCCGCG
CAGGCCGGAC AGACCATGCA GGCCGTCACT GAAGGATTGT TGCGGCTCAC ATACAACGGT
CAGCCGGTCA TCAAGGCGGT GCACACGGCC GACAGCCTGT ACAACGGTCC CTTGCGTGAC
AGGGCGCCGG ATATTGTCTG CGAACCGCAT GACGGCTTTG ATCTCAAGGC CAAGTTCGAC
AGGACGGAAG TTTTCGGCTT TTTCGGCAGA ACGGGTACGC ACACTGCGGA CGGAGCTTTT
TTTTACGATT CGATGCACGC GGCACCGCAG ATAATGCGTC ATACGGGCAG GCTGGTGCTG
GAGCATTTCG GTCTGGCCCC TGTCGCACAA TCAGGCCGCC CCGCGGCGAC GGGGCTTATC
CACCCGCCCG GCAACAAGTA A
|
|---|
| Protein sequence | MAAPVEHTVK RGRFPRLCPV PLPALPWWWP MLACRRMFWY TFAMSQKTQT DLHKVSHRRR
MVILGLDGLS LSMAVKLCAT GRFPHLSRLA LAPECGTVRA ELPELSPVNW TSFYTGCGPE
DHGIFGFTRI SPASYQMALA DFSQVAVPTI FDRLGDAGYA SRLVNLPNTY PVRPVKGAMT
VAGFVAPELS RAVHPPFLAH RLREAGYLLE ADTTRGAADL PYLLAQLRAT LQSRRYALEL
LWPDLGWDVF TIVLTETDRL FHFFYDAVTE PDHPQHEACM VLLQEWDALI GRVLELYDAL
PVPGRLMALA DHGFTRLITE VDINAWLRQN GYLYTQHHDG ATAELDATGI LPETRAFALD
PGRIYLHTAQ RFGRGRLTPA QAGQTMQAVT EGLLRLTYNG QPVIKAVHTA DSLYNGPLRD
RAPDIVCEPH DGFDLKAKFD RTEVFGFFGR TGTHTADGAF FYDSMHAAPQ IMRHTGRLVL
EHFGLAPVAQ SGRPAATGLI HPPGNK
|
|---|
| |