Gene Dde_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3544 
Symbol 
ID3758523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp3503690 
End bp3505084 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content63% 
IMG OID637784458 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_390032 
Protein GI78358583 
COG category[R] General function prediction only 
COG ID[COG1964] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAT TTTTTCTTGA AGCCGACATG CGCGAAAGCC TCTGCCCCGT ATGCCTGCAA 
CGTATTCCCG CGCGGCACGA ACACGAGGGT GATACCGTGC TGCAGGTAAA ACGCTGTCCC
CGCCACGGCG AATTCCGCAC CCCGGTATGG CGGGGGCTGC CCGCCATGCA GGGCTGGAAA
AAACCCAAGC TGCCCACTCC GCCCGCGCCC GGAGGAAGCA GAACAAAAGG GTGTCCCTTT
GACTGCGGCC TGTGTCCGGA ACACAACCAG CACACCTGCA CGCTGCTTTT TGAAATAACC
TCACGCTGCA ACCTGCACTG CCGGTTCTGT TTTGCCTCCG CCGGCAAGTC CGCCCCGCCC
GACCCGGATA TGGCCGCGCT GCGGACGCTC ATGGACAACG CCCGCCCGCG CACGGGCCCC
TGCAACGTGC AGCTTTCCGG CGGCGAGCCC ACCATGCGCG ACGACCTGCC GCAGATAATC
GGCATGGCAA AGGAACGTTT TCCTTTTGTC CAGCTGAATA CCAACGGTCT GCGCATAGCC
CGCGAACCTT CTCTTGCCGC GCAGCTGGCC CGTGCCGGAC TGGATTCCGT CTTTCTGCAG
TTTGACGGCA CACAGGATGC CATCTACACC GCCCTGCGCG GCATGCCCCT GCTGCGCGAA
AAAATGGAAG CCGTCAGACT GCTTTCCGAA GCGGGCATAG GCATTGTGCT GGTTCCTACA
GTGGTACCGG GAGTCAACGA CGACAATATC GGAGAAATTC TGCGCCTTGG TGCTGCCCTG
TGTCCTGCCG TGCGCGGAGT CCATTTCCAG CCGGTAAGCC ACTTCGGCAG ACACCCCGCG
CCAGACGGCG CAACCCGTGC CCCCGAACAG GGCCCGCCCC CCGCAGAACG CATCACCCTG
CCTGAAATCA TGCGCGGCCT CGAAAAGCAG ACCGCGGGAC TTGTGACCAC CGATGATTTT
CTGCCGCCCG GCTGCGAGCA TTCGCTGTGT TCATTCCATG CCAACTATCT GGTGCGTGAA
GACGGCGGAC TCCAGCGCCT TTCCGTACAG CGCAGTGCCT GCGACTGCCG CCCCAGACCC
GCCAGCGAAG GCGCCGACGC TGCCAAAGCC TTTGTCAAAC GCCAATGGGC CGCACCGCGT
AACGGCGCCC CGCAACAGCA GGAAAGCACC GCACCGCAGC CGCCCGCCGA CGACCTTGAC
CGTTTTCTGC AGCGTGCGGC CACGCACACC TTTGCCGTGT CGGCCATGGC CTTTCAGGAT
GTCTGGAACA TTGATCTGGA ACGGGTACGC GGATGCTGCA TCCATGTGGC CGCTCCGGAC
GGGCGCATAG TGCCTTTCTG CGCATGGAAC TGCACCAGTG CGCTGGGAGT GCCCCTGCAC
AGGAGCGGAC AATGA
 
Protein sequence
MNPFFLEADM RESLCPVCLQ RIPARHEHEG DTVLQVKRCP RHGEFRTPVW RGLPAMQGWK 
KPKLPTPPAP GGSRTKGCPF DCGLCPEHNQ HTCTLLFEIT SRCNLHCRFC FASAGKSAPP
DPDMAALRTL MDNARPRTGP CNVQLSGGEP TMRDDLPQII GMAKERFPFV QLNTNGLRIA
REPSLAAQLA RAGLDSVFLQ FDGTQDAIYT ALRGMPLLRE KMEAVRLLSE AGIGIVLVPT
VVPGVNDDNI GEILRLGAAL CPAVRGVHFQ PVSHFGRHPA PDGATRAPEQ GPPPAERITL
PEIMRGLEKQ TAGLVTTDDF LPPGCEHSLC SFHANYLVRE DGGLQRLSVQ RSACDCRPRP
ASEGADAAKA FVKRQWAAPR NGAPQQQEST APQPPADDLD RFLQRAATHT FAVSAMAFQD
VWNIDLERVR GCCIHVAAPD GRIVPFCAWN CTSALGVPLH RSGQ