| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3539 |
|---|
| Symbol | |
|---|
| ID | 3758518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3496915 |
|---|
| End bp | 3499638 |
|---|
| Gene Length | 2724 bp |
|---|
| Protein Length | 907 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637784453 |
|---|
| Product | aldehyde dehydrogenase, molybdenum-binding subunit apoprotein |
|---|
| Protein accession | YP_390027 |
|---|
| Protein GI | 78358578 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.232426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC GTTCGCTCAT GATCAACGGA GCGCCCCGGA TGGCCATTGC CAAGCCGGAC
ACAACGCTTG CAACGTACCT GCGCGAAAGC CTGGGGCTTA CCAGTGTCAA GATCGGTTGC
GGAACCGGTC AGTGCGGCAG CTGCAGCGTC ATTGTCGACG GCAAGGTTGT CCGCTCGTGC
AGCTACAAGA TGAGCCGCCT TGCCGACGGC GCGGTCATCA CCACGCTGGA AGGCATAGGC
ACTCCCGACC ACCTGCACCC CCTGCAGGTG GCATGGCTGG CCCACGGCGC CGCACAGTGC
GGTTTCTGCT CGCCGGGATT CATCGTTTCC GCCAAGGCTC TGCTTGATCA GAACACCTCG
CCCACCCGCG AGGATGTACG CGACTGGTTC CAGAAACATC GCAACGCCTG CCGCTGCACC
GGATACAAGC CGCTGGTGGA CGCCGTGATG GATGCCGCAG CTGTGCTGCG CGGCGACATG
AAAGTCAACG AGCTGCTGTT CAAAATTCCC GAAGACGGAC GCATCTGGGG CACCAAATAC
CCCCGTCCTT CCGGCATTGC CAAGGTTACC GGCACGCTGG ACTACGGCGC CGATCTGGGC
ATAAAAATGC CCGAAGGCAC CCTGCGCTGC GCTCTGGTGC AGGCCGAAGT CTCGCACGCA
CGCATTCTCG GCATCGACAC CTCCGAAGCG GAAACCATGC CCGGCGTCGC CAAGGTTGTG
ACCCACAAAG ACATCAAGGG CAAAAACCGC ATCACCGGTC TCATCACCTT TCCCACCAAC
AAAGGTGACG GCTGGGACCG CCCCATCCTC TGCGATGACA AGGTATACCA GTACGGCGAC
GCGATAGCCA TCGTATGCGC CGACACCGAA GAACACGCCA AGGCTGCTGC CGCCAAGGTC
AAGGTGGATC TGGAAGTCCT GCCCGCCTAC ATGAGCGCTC CGGAAGCCAT GGCCGAAGAC
GCCATGGAAA TTCATCCCGG CACCCCCAAC GTGTACTTTG AACAGAAAAT CGCCAAGGGC
GAGGAAACAG CATCCTACTT TGAAAAAGCC GATGTGGTGG CCGAAGGCGA CTTCTATGTG
GGCCGTCAGC CCCATATGCC CATCGAGCCC GACGTGGGTT TTGCCTTCTT CAACGAAGAC
GGCAAGCTGT GCATCCATTC CAAGTCCATC GGCCTGCACC TGCACCTGTA TATGATCGCT
CCCGGTCTGG GCATTGAACC CGAAAACGTC ATCATGGTGC AGAACCCCGC AGGCGGCACC
TTCGGCTACA AGTTCAGCCC CACCATGGAA GCGCTGGTCG GCGCGGCATG CATGGCCACC
GGCAAGCCCG TATACCTTAA CTACACATGG TACCAGCAAC AGACCTACAC CGGCAAACGC
TCGCCTTTCT TCATGAATGT GCGTTTTGCT GCCGACAAGC AGGGCAAGCT GCTTGCCATG
GAAAGCGACT GGTCGGTGGA CCACGGTCCC TATTCCGAAT TCGGCGACCT GCTGACCCTG
CGCGGCGCAC AGTTCATCGG TGCCGGCTAC GACATTCCCA ACATCCGCGG CGAAGGCCGC
ACCGTCTGCA CCAACCACGC ATGGGGTTCG GCATTCCGCG GCTACGGTTC GCCCCAGAGT
GAGTTCGCCT CTGAAGTGCT TATGGACATG CTGGCCGAAA AACTGGGCAT GGATCCGCTG
GAACTGCGCT ACAAAAACGC ATACCGCCCC GGAGCCACCA CGCCCACCGG CCAGAATCCC
GAAGTATTCA GCCTGCCCGA CATGCTTGAC ACCGCGCGGC CCAAGTACAA GGCCGCACTG
GAAAAAGCAG CCAAAAACAG CACCGCCGAA GTAAAACGCG GTGTGGGTAT ATCGCTGGGC
GTTTACGGCT GCGGTCTTGA CGGCCCCGAC ACCGCCGAAG TCGATGCAGA ACTGCATCCC
GACGGCACCG TCAGCATCTA CACCACATGG CACGACCACG GACAGGGTGC CGACATCGGC
GCGCTGACCA CCGCCCACGA GGCGCTGCGC CCGCTGGGCA TCGCTCCTGA AAACATCAAG
CTGGTGCTCA ACGATACCGA ATTCTGCCCC AACGGCGGCC CCGCAGGCGG CAGCCGCTCG
CAGGTTGTGG TGGGACGCGG CATAAAAGCG GCATGTGAGC TGCTGCTCGG CGGCATGCGC
AAGAGCGACG GCACCTACCG CACCTATCAG GAAATGGTCG ATGAAAAGAT AGCCACCAAG
TACAACGGTA AATGGACAGC CCCCTGCACC GACTGCGACA CCAACGGTCA GGGCAACCCC
TTTGCCGTGT ACATGTACGG CATCTTCATG GCCGAAGTGG CCGTGGAAGT GGCCACCGGC
AAGACCACCG TGGAAAAAAT GACCATGATC GCCGACGTGG GCAAAATCGT GAACAAGCTG
GCCGTGGACG GACAGATGTA CGGCGGTGTT GCTCAGGCCA TCGGTCTGGC CCTCACTGAA
GACTTCGAAG ACATCAAAAA GCACTCCACC ATGAAGGGTG CGGGCTTCCC CTACATCAAG
CAGGTGCCCG ATGAAATCGA ACTGATCTAC CACGAATCGG ACCGGCCTGA AGGGCCCTTC
GGCGCAGCGG GTGTGGGCGA ACTGCCGCTC ACCTGCCCCC ATGCAGCCGT GATCAACGCC
ATATACAACG CATGCGGCGT ACGCATCACC CGACTGCCGG CCCTGCCGGA AAAGGTGCTT
GCAGGCCTGC AGGCCAAGGC ATAG
|
|---|
| Protein sequence | MIKRSLMING APRMAIAKPD TTLATYLRES LGLTSVKIGC GTGQCGSCSV IVDGKVVRSC
SYKMSRLADG AVITTLEGIG TPDHLHPLQV AWLAHGAAQC GFCSPGFIVS AKALLDQNTS
PTREDVRDWF QKHRNACRCT GYKPLVDAVM DAAAVLRGDM KVNELLFKIP EDGRIWGTKY
PRPSGIAKVT GTLDYGADLG IKMPEGTLRC ALVQAEVSHA RILGIDTSEA ETMPGVAKVV
THKDIKGKNR ITGLITFPTN KGDGWDRPIL CDDKVYQYGD AIAIVCADTE EHAKAAAAKV
KVDLEVLPAY MSAPEAMAED AMEIHPGTPN VYFEQKIAKG EETASYFEKA DVVAEGDFYV
GRQPHMPIEP DVGFAFFNED GKLCIHSKSI GLHLHLYMIA PGLGIEPENV IMVQNPAGGT
FGYKFSPTME ALVGAACMAT GKPVYLNYTW YQQQTYTGKR SPFFMNVRFA ADKQGKLLAM
ESDWSVDHGP YSEFGDLLTL RGAQFIGAGY DIPNIRGEGR TVCTNHAWGS AFRGYGSPQS
EFASEVLMDM LAEKLGMDPL ELRYKNAYRP GATTPTGQNP EVFSLPDMLD TARPKYKAAL
EKAAKNSTAE VKRGVGISLG VYGCGLDGPD TAEVDAELHP DGTVSIYTTW HDHGQGADIG
ALTTAHEALR PLGIAPENIK LVLNDTEFCP NGGPAGGSRS QVVVGRGIKA ACELLLGGMR
KSDGTYRTYQ EMVDEKIATK YNGKWTAPCT DCDTNGQGNP FAVYMYGIFM AEVAVEVATG
KTTVEKMTMI ADVGKIVNKL AVDGQMYGGV AQAIGLALTE DFEDIKKHST MKGAGFPYIK
QVPDEIELIY HESDRPEGPF GAAGVGELPL TCPHAAVINA IYNACGVRIT RLPALPEKVL
AGLQAKA
|
|---|
| |